DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18268 and arrd-6

DIOPT Version :10

Sequence 1:NP_649739.1 Gene:CG18268 / 40923 FlyBaseID:FBgn0037520 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001254290.1 Gene:arrd-6 / 185541 WormBaseID:WBGene00009579 Length:469 Species:Caenorhabditis elegans


Alignment Length:346 Identity:74/346 - (21%)
Similarity:128/346 - (36%) Gaps:108/346 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FNLSRAAAIYYNGEQISGSLTVTVDGKKSFKLEGVSVTLHGVSTVHWRESLRGPPEIEHNDSTGN 71
            |::.....:||.||.||||  |.::..::.|:.|:.|.|.|  .||                   
 Worm    34 FDIRLNKDVYYAGETISGS--VLLENTENIKIRGIRVLLRG--KVH------------------- 75

  Fly    72 LECPKVDYNGSK------VHINETKKL----------NEVLQLENGTFRLGDFNFQLPE-NLPAT 119
             ...||..:|.:      .::.:.|:|          :.|..|..|..:. .|||.||: :||.:
 Worm    76 -ATLKVVKSGERRTLKDDQYVLDEKQLLWGKDKSDESDSVPILARGVHQF-SFNFDLPQSSLPCS 138

  Fly   120 CRLPFGNVEYVLKVVLERR--------------GTHNKCFQQRLVI------RK-----CVELAD 159
            .......:.|..||:::..              |.|....:::.:.      ||     |.:...
 Worm   139 LESRHCTIRYYFKVIIDIPYASSPQGIKYFTIIGPHIDSMEEKYLSPLSAQDRKVNCCWCCQRGA 203

  Fly   160 LKPQYMETANMGLTLPRSVFVPGQS--VSYEICSKDG-VQDFLTRLCKKIS-YTSQQPSAKTKNV 220
            |.        :.:.|.|:.:|.|::  |..:|.::.. .|..:.||.:.:. :..:....:.|.:
 Worm   204 LA--------LRIILERTAYVCGENIRVRAQIENRQSTAQSLVIRLVQHVEVFVEKGLLGENKMM 260

  Fly   221 TQVLSE--------------SSELNGNLRLPLTAPIMSHSDQLDPIQISYYI------ETFNSLN 265
            :.|:.|              .|.|...:|||:..|.:....:|  |||.|.:      |..|.. 
 Worm   261 SCVVFEHKSPAIAANSQGKYDSTLEQPIRLPVVPPTLVGVCRL--IQIYYALRVCMEDEKGNEC- 322

  Fly   266 APIKVPIFVATV------APP 280
            ..|..|:.|||:      |||
 Worm   323 LHIDFPLTVATIPYRIPNAPP 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18268NP_649739.1 Arrestin_N 5..153 CDD:451447 37/182 (20%)
Arrestin_C 172..279 CDD:460676 30/136 (22%)
arrd-6NP_001254290.1 Arrestin_N 34..177 CDD:425619 37/167 (22%)
Arrestin_C 201..336 CDD:460676 31/145 (21%)

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