DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18268 and arrd-9

DIOPT Version :10

Sequence 1:NP_649739.1 Gene:CG18268 / 40923 FlyBaseID:FBgn0037520 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_496661.1 Gene:arrd-9 / 184515 WormBaseID:WBGene00008843 Length:312 Species:Caenorhabditis elegans


Alignment Length:317 Identity:66/317 - (20%)
Similarity:122/317 - (38%) Gaps:59/317 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSRAAAIYYNGEQISGSLTVTVDGKKSFKLEGVSVTLHGVSTVHWRESLRGPPEIEHNDSTGNLE 73
            |:....::|.|:.:||.:.:..:  |......:::|:.|.:...|                    
 Worm    12 LAEPEKLHYPGDTVSGHIVLKFE--KFSTCRAITLTVKGKAETGW-------------------- 54

  Fly    74 CPKVDYNGSKVHINETKKLNEVLQLEN----GTFRLGDFNFQLPENLPATCRLPFGNVEYVLKVV 134
             ..|...|...:.||:..|.:....||    ||.|: .|::.:|||:|.:...|||.:.:.:||.
 Worm    55 -DNVTKVGQWTYFNESGVLWKAEMSENRIEPGTHRI-PFDYTVPENIPQSFEGPFGFIRFYIKVH 117

  Fly   135 LERRGTHNKCFQQRLVIRK---CVELADLKPQYMETANMGLTLPRSVFVPGQSVSYEICSKDG-- 194
            ::|....::|.::..::.:   .|....|.|:::......|...|........:|..|...|.  
 Worm   118 MDRPHALDQCVKKEFLVTQK
PTVVSKKHLGPEHIIRYCQKLNCNRGEIYFEAQLSNRIIFFDDPI 182

  Fly   195 -----VQDFLTRLCKKIS---------YTSQQPSAKTKNVTQVLSESSELN-GNLRLPLTAPIMS 244
                 :::..:|..||||         |::.....||.:|....:..|||. .|..:.::...|.
 Worm   183 SLIIKIKNCSSRTIKKISLEAFQRIEYYSTTSACRKTHSVLIGKTGKSELKIRNDEIAISTFSMK 247

  Fly   245 HSDQLDP------IQISYY----IETFNSLNAPIKVPIFVATVAPPVNSQTESSQLC 291
            ..:...|      ||:||.    :.|.....||:..|: ...|....:..||..:.|
 Worm   248 FKEPATPSFASELIQVSYVLLVNLFTDGFWAAPLVFPV-EFEVGKKSDVGTEDEETC 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18268NP_649739.1 Arrestin_N 5..153 CDD:451447 31/147 (21%)
Arrestin_C 172..279 CDD:460676 29/133 (22%)
arrd-9NP_496661.1 Arrestin_N 10..137 CDD:451447 31/148 (21%)
Arrestin_C 162..277 CDD:214976 24/114 (21%)

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