DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10086 and ROD1

DIOPT Version :10

Sequence 1:NP_649736.3 Gene:CG10086 / 40920 FlyBaseID:FBgn0037517 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_014661.1 Gene:ROD1 / 854183 SGDID:S000005544 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:544 Identity:88/544 - (16%)
Similarity:188/544 - (34%) Gaps:161/544 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VITGKVIVNLNKTKKLRGIKLQISG-------------------YAQAQWRIRRH---------- 57
            :::|.:::::.:..:::.:.|::.|                   |::.:..|..|          
Yeast    40 LLSGTIVLSITEPIQIKSLALRLFGRLRLNIPTVLQTVHGPHKRYSKFERNIYSHFWDDFNIKSY 104

  Fly    58 ----------GKAVAIQNPKKRSKHQYSGREDYIASTTYLMGSEQGS---NFN-MDAGTYTYTFA 108
                      || :.|.:....:......|:..:::.:.:..:.|.|   |:: :..|.|.:.|:
Yeast   105 FQNLYDNHNNGK-ITISSKSSTNLAALPKRKRALSTASLISSNGQTSASKNYHTLVKGNYEFPFS 168

  Fly   109 CPIPSHCPSSFEG-AYGHIRYLAKVTFLKPGASNRTHNVGFTVLKLLDLNQETKMLREPASNEAV 172
            ..||.....|.|| ....:.|..:.|..:|...:........|::.|.::          :.|..
Yeast   169 AIIPGSLVESVEGLPNAAVTYALEATIERPKQPDLICKKHLRVIRTLAID----------AVELS 223

  Fly   173 EHFCLMHTKPVQLKVTLQQQGYVPGQFMLIHAHVRNDSSSDCRKLLIMLHLRATYTADTPSLRTT 237
            |...:.::.|.::..|:.    :|.:.:.|       .||....:||:..|:        .|:..
Yeast   224 ETVSVDNSWPEKVDYTIS----IPTKAIAI-------GSSTMINILIVPILK--------GLKLG 269

  Fly   238 SEKIMLVKRE--CG-------------------PVAHNAQ----RTYTET--------------- 262
            ..:|.||:..  ||                   |:.|.||    |:..|.               
Yeast   270 PVRISLVENSQYCGSYGGVINQERMVAKLKLKDPLKHVAQIKKKRSLNEAADEGVDTDTGEFQDK 334

  Fly   263 ------LRIPATAPTCEHLSKV---VRVSYEVR-VVAVMN--------------WLMANPRLIIP 303
                  |.|||:...|....::   ::|.:::: .::::|              .|..:|  .:|
Yeast   335 WEVRALLNIPASLTKCSQDCRILSNIKVRHKIKFTISLLNPDGHISELRAALPVQLFISP--FVP 397

  Fly   304 VTIGNVPLATAVS------GPDFLPT----NAFPSGSSL-PADLPCTSTRAMELAQMAASGVSNS 357
            |   ||..:..:.      ||.:..|    |:|.|.:.: .::......|:....|:::.....|
Yeast   398 V---NVKTSDVIERTLKTFGPSYQVTSQHDNSFSSKNFVDDSEEDVIFQRSASALQLSSMPTIVS 459

  Fly   358 GYEMAEDLEDFELPEDGDDELEAADDFVPDLPPPTYEQAMFMTTDIADTDAN-----TVSEASRF 417
            |..:..:..|.|.....|..:..:....|:.....|::.....|:..:|.|:     ..|:|...
Yeast   460 GSTLNINSTDAEATAVADTTMVTSLMVPPNYGNHVYDRVYGEVTNEDETSASASSSAVESQAIHN 524

  Fly   418 TPRYPVFDVDTFQSP--PPNPPQK 439
            .....:.|.:...:|  .|||..|
Yeast   525 IQNLYISDSNNSNNPILAPNPQIK 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10086NP_649736.3 Arrestin_N 5..157 CDD:425619 26/178 (15%)
Arrestin_C 180..311 CDD:214976 34/194 (18%)
ROD1NP_014661.1 Arrestin_N <157..215 CDD:451447 12/57 (21%)
Arrestin_C 232..395 CDD:214976 30/183 (16%)

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