DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10086 and arrd-10

DIOPT Version :9

Sequence 1:NP_649736.3 Gene:CG10086 / 40920 FlyBaseID:FBgn0037517 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001364600.1 Gene:arrd-10 / 174936 WormBaseID:WBGene00010268 Length:401 Species:Caenorhabditis elegans


Alignment Length:304 Identity:63/304 - (20%)
Similarity:115/304 - (37%) Gaps:52/304 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SKHQYSGREDYIASTTYLMGSEQGSNFNMDAGTYTYTFACPIPSHCPSSFEGAYGHI--RYLAKV 132
            |:|.....:.:|..|...:.:.:|.:. :..|.:.......:|.|.|.:|.|.:|.|  |:|.|:
 Worm    56 SQHTLIKEQLHIPFTAIQLPTTKGIDV-IPEGHHRLPIFLNVPHHMPGTFNGKFGAIVYRFLIKL 119

  Fly   133 TFLKPGASNRTHNV----GFTVLKLLDLNQETKMLREPASNEAVEHFC-LMHTKPVQLKVTLQQQ 192
            . :|..:|.....:    ...||..:.|.|:....:..:.:..|:... .|:.....:|..:::.
 Worm   120 K-VKRFSSGDEGTIECEKAVDVLGRISLEQQPSFAQPVSIDRHVKKKAFFMNRLEAHIKFEIERA 183

  Fly   193 GYVPGQFMLIHAHVRNDSSSDCRKLLIMLHLR-----ATYTADTPSLRTTSEKIMLVKRECGPVA 252
            .|..|..:|:...::|:..|:..| .:.|.||     |:..|.....|..:..|:      |.|.
 Worm   184 AYSVGDHILVTGEIKNEHLSNPIK-HVALELRQHILYASGDAQRSDTRLITRLIL------GSVP 241

  Fly   253 HNAQRTYTETLRIPATA-PTCEHLSKVVRVSYEVRVVAVMNWLMANP---RLIIPVTIGN----- 308
            .........:.::|... |:.......|:|:||:        |:.|.   .:..||.:||     
 Worm   242 PTETFAVFHSFQVPFDCYPSLVWNGNPVQVTYEL--------LLTNSGCFEIGTPVFLGNYGSPN 298

  Fly   309 -------VPLATAVSGPDFLPTNAF----PSGSSLPADLPCTST 341
                   .|.:|:...|   |:..:    ||..|...|.|..||
 Worm   299 STRRSIMYPESTSGEAP---PSTTYYCVPPSEMSFTVDPPPYST 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10086NP_649736.3 Arrestin_N 5..157 CDD:278754 20/92 (22%)
Arrestin_C 179..308 CDD:280848 26/137 (19%)
arrd-10NP_001364600.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3780
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11188
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.