DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11286 and nhr-111

DIOPT Version :9

Sequence 1:NP_649735.1 Gene:CG11286 / 40919 FlyBaseID:FBgn0037516 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_507060.2 Gene:nhr-111 / 185757 WormBaseID:WBGene00003701 Length:311 Species:Caenorhabditis elegans


Alignment Length:137 Identity:32/137 - (23%)
Similarity:50/137 - (36%) Gaps:38/137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RTKTTSLVSLSGLASRYEFHRLQELDEWYEPRIKFHDEADASLHPSYDIKHFQYDLNCYVRYLDS 114
            ||..:..|....|.|..|:.:  .|...:..|::|..|     |..::|     |.:..:.:|.:
 Worm   117 RTSHSYTVEYVELPSFREYSK--GLLPTHSDRLRFQHE-----HAQHEI-----DTSSVLVHLKN 169

  Fly   115 KAKYDRQF-----LHEMEHIIANQRNICDQFFLKKILCYKTMWPPLHTKRELNN----FV-SKFF 169
            ..::.:||     |.::|.         .|..|       |.||.|.......|    |: .||.
 Worm   170 ALQWVQQFSLFAVLSDVEK---------SQIIL-------TQWPHLLCLALFENSEKIFIDEKFA 218

  Fly   170 QLPPKEK 176
            ||..|.|
 Worm   219 QLAEKFK 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11286NP_649735.1 DUF4790 92..184 CDD:292656 22/95 (23%)
nhr-111NP_507060.2 NR_DBD_like 42..114 CDD:143512
Glycosyltransferase_GTB_type 115..>256 CDD:299143 32/137 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4964
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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