DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11286 and Laptm5

DIOPT Version :9

Sequence 1:NP_649735.1 Gene:CG11286 / 40919 FlyBaseID:FBgn0037516 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_034816.1 Gene:Laptm5 / 16792 MGIID:108046 Length:261 Species:Mus musculus


Alignment Length:91 Identity:19/91 - (20%)
Similarity:29/91 - (31%) Gaps:30/91 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 YLDSKAKYDRQFLHEMEHI----IANQRNICDQFFLKKIL-----------CYKTMWPPLHTKRE 160
            ||:.|:.....:|...|.:    ..|...|....|:..::           |||.:   .|....
Mouse   160 YLNFKSMNHMNYLPSQEGVPHSQFINMMLIFSVAFITVLILKVYMFKCVYTCYKFL---KHMNSA 221

  Fly   161 LNNFVSKFF------------QLPPK 174
            :.:..||.|            .||||
Mouse   222 MEDSSSKMFLKVALPSYEEALSLPPK 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11286NP_649735.1 DUF4790 92..184 CDD:292656 19/91 (21%)
Laptm5NP_034816.1 mtp 4..261 CDD:273274 19/91 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..261 4/6 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4964
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.