DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp7 and Cfd

DIOPT Version :10

Sequence 1:NP_649734.2 Gene:Sp7 / 40918 FlyBaseID:FBgn0037515 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:225 Identity:74/225 - (32%)
Similarity:111/225 - (49%) Gaps:32/225 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 CGGSLINNRYVLTAAHCVIGAVETEVGHLTTVRLGEYDTSKDVDCIDDICNQPILQL-GIEQATV 230
            |||:|::.::||:||||:.|..:.||   ..|.||.:..|..         :|...| .::...:
  Rat    51 CGGTLVDEQWVLSAAHCMDGVTKDEV---VQVLLGAHSLSSP---------EPYKHLYDVQSVVL 103

  Fly   231 HPQYDPANKNRIHDIALLRLDRPVVLNEYIQPVCLPLVSTRMAINTGELLVVSGWGRTTTA-RKS 294
            ||...|.:..  .|:.|.:|.....|..:::|  |||......:..|.|..|:|||..|.| |:.
  Rat   104 HPGSRPDSVE--DDLMLFKLSHNASLGPHVRP--LPLQREDREVKPGTLCDVAGWGVVTHAGRRP 164

  Fly   295 TIKQRLDLPVNDHDYCARKFATRNIH---LISSQLCVGGEFYRDSCDGDSGGPLMRRGFDQAWYQ 356
            .:.|:|.:.:.|.:.|    ..|..|   :..:.:|.... .||:|.|||||||:..  |..   
  Rat   165 DVLQQLTVSIMDRNTC----NLRTYHDGAITKNMMCAESN-RRDTCRGDSGGPLVCG--DAV--- 219

  Fly   357 EGVVSFGNR-CGLEGWPGVYTRVADYMDWI 385
            |.||::|:| ||....|||:||||.|:.||
  Rat   220 EAVVTWGSRVCGNRRKPGVFTRVATYVPWI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp7NP_649734.2 CLIP 31..84 CDD:463440
Tryp_SPc 137..388 CDD:238113 74/225 (33%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 74/225 (33%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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