DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp7 and CG4613

DIOPT Version :9

Sequence 1:NP_649734.2 Gene:Sp7 / 40918 FlyBaseID:FBgn0037515 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001261841.1 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster


Alignment Length:314 Identity:109/314 - (34%)
Similarity:158/314 - (50%) Gaps:53/314 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SFGSQEATSAAPP--PTTTSSSSRGQDGQAGLGNLLPSPPKCGPHSFSNKVYNGNDTAIDEFNWM 151
            |.||...:|:|.|  |.      .|...:|...|...| ..||..:. |::..|.....:::.|:
  Fly    95 SLGSTSLSSSASPVFPL------EGGGAKAFRVNRCAS-CTCGVPNV-NRIVGGTQVRTNKYPWI 151

  Fly   152 ALLEYVDNRGRRELSCGGSLINNRYVLTAAHCVIGAVETEVGHLTTVRLGEYDTSKDVDCIDDIC 216
            |.:    .|| ..|.|||:|||:||||||||||.|.....|    :|||.:.|.|.         
  Fly   152 AQI----IRG-TFLFCGGTLINDRYVLTAAHCVHGMDMRGV----SVRLLQLDRSS--------- 198

  Fly   217 NQPILQLGIEQ----ATVHPQYDPANKNRIHDIALLRLDRPVVLNEYIQPVCLPLVSTRMAINTG 277
                ..||:.:    |..|..|||.  :.:|||||||||:|:.|.:.::|.|||  |..:.....
  Fly   199 ----THLGVTRSVAFAHAHVGYDPV--SLVHDIALLRLDQPIPLVDTMRPACLP--SNWLQNFDF 255

  Fly   278 ELLVVSGWGRTTT-ARKSTIKQRLDLPVNDHDYCARKFATRNIHLISSQLCVGGEFY-----RDS 336
            :..:|:|||.:.. ...|::.|.:.:|:..:..| |..:.|:: ::.:.:|.|   |     ||:
  Fly   256 QKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQC-RATSYRSM-IVDTMMCAG---YVKTGGRDA 315

  Fly   337 CDGDSGGPLMRRGFDQAWYQEGVVSFGNRCGLEGWPGVYTRVADYMDWIVETIR 390
            |.|||||||:.|  |:.:...||||||..|.....|||||||:.|::||....|
  Fly   316 CQGDSGGPLIVR--DRIFRLAGVVSFGYGCAKPDAPGVYTRVSRYLEWIAVNTR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp7NP_649734.2 CLIP 31..84 CDD:288855
Tryp_SPc 136..385 CDD:214473 92/258 (36%)
Tryp_SPc 137..388 CDD:238113 94/260 (36%)
CG4613NP_001261841.1 Tryp_SPc 136..362 CDD:214473 92/258 (36%)
Tryp_SPc 137..362 CDD:238113 92/257 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457378
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
43.940

Return to query results.
Submit another query.