DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp7 and Hpn

DIOPT Version :10

Sequence 1:NP_649734.2 Gene:Sp7 / 40918 FlyBaseID:FBgn0037515 Length:391 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:303 Identity:86/303 - (28%)
Similarity:126/303 - (41%) Gaps:88/303 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 CGPHSFS-NKVYNGNDTAIDEFNWMALLEYVDNRGRRELSCGGSLINNRYVLTAAHC-------- 183
            ||..... :::..|.|:::..:.|...|.|....     .|||||::..:|||||||        
  Rat   194 CGRRKLPVDRIVGGQDSSLGRWPWQVSLRYDGTH-----LCGGSLLSGDWVLTAAHCFPERNRVL 253

  Fly   184 -----VIGAVETEVGHLTTVRLGEYDTSKDVDCIDDICNQPILQLGIEQATVHPQY----DPANK 239
                 ..|||.....|                         .:|||::....|..|    ||...
  Rat   254 SRWRVFAGAVARTSPH-------------------------AVQLGVQAVIYHGGYLPFRDPTID 293

  Fly   240 NRIHDIALLRLDRPVVLNEYIQPVCLPLVSTRMAINTGELLVVSGWGRTT-TARKSTIKQRLDLP 303
            ...:||||:.|...:.|.|||||||||  :...|:..|::..|:|||.|. ..:::.:.|...:|
  Rat   294 ENSNDIALVHLSSSLPLTEYIQPVCLP--AAGQALVDGKVCTVTGWGNTQFYGQQAVVLQEARVP 356

  Fly   304 VNDHDYCARKFATRNIHLISSQLCVGGEFYR-----------------DSCDGDSGGPLM---RR 348
            :                 ||:::|...:||.                 |:|.||||||.:   |.
  Rat   357 I-----------------ISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRI 404

  Fly   349 GFDQAWYQEGVVSFGNRCGLEGWPGVYTRVADYMDWIVETIRP 391
            .....|...|:||:|..|.|...|||||:|.|:.:||.:.|:|
  Rat   405 SGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIKP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp7NP_649734.2 CLIP 31..84 CDD:463440
Tryp_SPc 137..388 CDD:238113 82/288 (28%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736 2/5 (40%)
Tryp_SPc 204..441 CDD:238113 80/285 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.