DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd3 and yobB

DIOPT Version :10

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_416357.1 Gene:yobB / 948329 ECOCYCID:G7015 Length:218 Species:Escherichia coli


Alignment Length:218 Identity:38/218 - (17%)
Similarity:63/218 - (28%) Gaps:78/218 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 APIEKQREAIWNKVK---TMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFP-----WCEFAEEAE 144
            |..|.::.::..:|.   ..::|||...|.::.                ||     .|:::..|.
E. coli     9 AQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLV----------------FPSLSLLGCDYSRRAL 57

  Fly   145 NGP-------------TT---KMLAELAKAYNMVIIHSILE----------RDMEHGETIWNTAV 183
            ..|             ||   .::|.|...||...|..|..          ....||..:...:.
E. coli    58 PAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSR 122

  Fly   184 VIS------------------NSGRYLGKHRKNHIPRVGDFNESTY----YMEGNTGHPVFETEF 226
            .|:                  .:|:.||:.......|...|....|    .|....|:.....|:
E. coli   123 TITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGNSALWDEY 187

  Fly   227 GKLAVN------ICYGRHHPQNW 243
            |:|.|.      :..|:...|.|
E. coli   188 GRLIVRADRGSLLLVGQRSSQGW 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 ML_beta-AS 9..372 CDD:143611 38/218 (17%)
yobBNP_416357.1 CN_hydrolase 5..211 CDD:425873 38/218 (17%)

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