DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment pyd3 and BETA-UP

DIOPT Version :9

Sequence 1:	NP_649732.1	Gene:	pyd3 / 40916	FlyBaseID:	FBgn0037513	Length:	386	Species:	Drosophila melanogaster
Sequence 2:	NP_201242.2	Gene:	BETA-UP / 836558	AraportID:	AT5G64370	Length:	408	Species:	Arabidopsis thaliana

Alignment Length:	381	Identity:	241/381 - (63%)
Similarity:	292/381 - (76%)	Gaps:	5/381 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 NLNDCLEKHLPPDELKEVKRILYGVEEDQTLE---LPTSAKDIAEQNGFDIKGYRFTAREEQTRK 69
            :|:..|..:|.|:..:||.|:|.|....::||   ||.|||.::.::.||::...|:|.:||.|.
plant    22 SLHQLLSANLKPELYQEVNRLLLGRNCGRSLEQIVLPESAKALSSKHDFDLQAASFSADKEQMRN 86

  Fly    70 RRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKF 134
            .|:||||.|||||.:|||||...|...|::|:|.:|.||..||.||:|.||||||||||||||:
plant    87 PRVVRVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTMPFAFCTRER- 150

  Fly   135 PWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNH 199
            .||||||..: |.:||.|.||||.|||||:..|||||::|||.:|||||:|.|:|..:|||||||
plant   151 RWCEFAEPVD-GESTKFLQELAKKYNMVIVSPILERDIDHGEVLWNTAVIIGNNGNIIGKHRKNH 214

  Fly   200 IPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRL 264
            ||||||||||||||||:||||||||.|||:|||||||||||.||:.|||||||||||||||:|.|
plant   215 IPRVGDFNESTYYMEGDTGHPVFETVFGKIAVNICYGRHHPLNWLAFGLNGAEIVFNPSATVGEL 279

  Fly   265 SEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTP 329
            |||:|.|||||||||||||...|||||||.|||.:|||||...|.:||.|||||:.:|||.|.||
plant   280 SEPMWPIEARNAAIANSYFVGSINRVGTEVFPNPFTSGDGKPQHNDFGHFYGSSHFSAPDASCTP 344

  Fly   330 SLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKE 385
            ||||.|||||:.::|||||||.||.||||||.|..:||:...|..:..||||::.:
plant   345 SLSRYKDGLLISDMDLNLCRQYKDKWGFRMTARYEVYADLLAKYIKPDFKPQVVSD 400

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pyd3	NP_649732.1	PLN00202	9..385	CDD:177792	241/378 (64%)
pyd3	NP_649732.1	ML_beta-AS	9..372	CDD:143611	236/365 (65%)
BETA-UP	NP_201242.2	PLN00202	4..408	CDD:177792	241/381 (63%)
BETA-UP	NP_201242.2	ML_beta-AS	23..387	CDD:143611	236/365 (65%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	419	1.000	Domainoid score	I122
eggNOG	1	0.900	-	-		E1_COG0388
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H9471
Inparanoid	1	1.050	493	1.000	Inparanoid score	I324
OMA	1	1.010	-	-		QHG55618
OrthoDB	1	1.010	-	-		D996578at2759
OrthoFinder	1	1.000	-	-		FOG0006264
OrthoInspector	1	1.000	-	-		oto3821
orthoMCL	1	0.900	-	-		OOG6_102400
Panther	1	1.100	-	-	LDO	PTHR43674
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4546
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.840