DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pyd3 and Vnn3

DIOPT Version :10

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001102606.1 Gene:Vnn3 / 498992 RGDID:1560609 Length:500 Species:Rattus norvegicus


Alignment Length:257 Identity:58/257 - (22%)
Similarity:100/257 - (38%) Gaps:75/257 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VGAI--------QNSIVIP--TTAPIEKQREAIW--NK----VKTMIKAAAEAGCNIVCTQEAWT 123
            |||:        ::::::|  |.:|:..: ||:.  ||    ::..||.||..|.:|:.|.|...
  Rat    20 VGAMDTFIAAVYEHAVILPNKTESPVSNE-EALLLINKNIDILENAIKLAARQGAHIIVTPEDGI 83

  Fly   124 MPFAFCTREKFPWCEFAEEAENG-------------PTTKMLAELAKAYNMVIIHSI-------- 167
            ..:.|.....:|:.|...:.|..             |..:.|:.|||..::.|:.:|        
  Rat    84 YGWIFTRETIYPYLEDIPDPEVNWIPCRDPKRFGFTPVQERLSCLAKENSIYIVANIGDKKPCNT 148

  Fly   168 ----LERDMEHGETIWNTAVVISNSGRYLGKHRKNHI--PRVG-DFNESTYYMEGNTGHPVFETE 225
                ..||   |...:||.||..:.||...::.|.::  |.:. ||.:.:..:       .|:|.
  Rat   149 TDPQCPRD---GRYQYNTNVVFDSEGRLTARYHKYNLFEPEIQFDFPKDSELV-------TFDTP 203

  Fly   226 FGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPI 287
            |||..|..|:.        :|..:.|.:|...|.....|....|            |.|:|:
  Rat   204 FGKFGVFTCFD--------IFSYDPAVMVVKDSRVDSVLLPTAW------------YNTLPL 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 ML_beta-AS 9..372 CDD:143611 58/257 (23%)
Vnn3NP_001102606.1 biotinidase_like 26..310 CDD:143591 55/251 (22%)
Vanin_C 337..488 CDD:465946
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.