DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd3 and nit1

DIOPT Version :10

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001004638.2 Gene:nit1 / 447900 ZFINID:ZDB-GENE-040912-65 Length:316 Species:Danio rerio


Alignment Length:301 Identity:61/301 - (20%)
Similarity:110/301 - (36%) Gaps:38/301 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AREEQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPF 126
            |...|:|....|.|.|:......|       .:||.:.....:::.|...|.::|...|.    |
Zfish    22 ASRGQSRMSSSVPVAAVCQMTASP-------DKEANFRTCTRLVEQAKVGGASMVFLPEG----F 75

  Fly   127 AFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVI----IHSILERDMEHGETIWNTAVVISN 187
            .:....:....:.:|..: |.|......||:..::.:    .|. ...|.:....|:|:.::|:.
Zfish    76 DYIGSSREETLQLSESLD-GETISRYTHLARKLDVWLSLGGFHE-QGHDWKTDRRIYNSHIIING 138

  Fly   188 SGRYLGKHRKNHIPRVG------DFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMF 246
            .|..:..:||.|:..|.      ...||.:.:.|....|..:|..||:.:.:||....|:.....
Zfish   139 QGEIVSVYRKTHLFDVELSSKGVSLKESAFTIPGPRLVPPVQTPIGKVGLGVCYDLRFPELSAAL 203

  Fly   247 GLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEF 311
            ..:||||:..|||.........|.:..|..|:....|.:...:||               ||...
Zfish   204 QRHGAEILTYPSAFTVATGTAHWEVLLRARAVETQCFVLAAAQVG---------------AHHSK 253

  Fly   312 GPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVK 352
            ...||.:....|.|.........::|:.:..::|...|.::
Zfish   254 RASYGHALAVDPWGEVLGDCGGTQEGVTLAHINLQKLRDIR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 ML_beta-AS 9..372 CDD:143611 61/301 (20%)
nit1NP_001004638.2 None

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