DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd3 and Vnn1

DIOPT Version :10

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001020794.1 Gene:Vnn1 / 29142 RGDID:1310075 Length:512 Species:Rattus norvegicus


Alignment Length:308 Identity:65/308 - (21%)
Similarity:124/308 - (40%) Gaps:75/308 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 QNSIVIP--TTAPI-EKQREAIWNK----VKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPW 136
            ::::::|  |..|: ..:..|:.|:    ::..|.:||:.|.:|:.|.|.......|.....:|:
  Rat    33 EHAVILPKVTLLPVSHSEALALMNQNLDLLEGAILSAAKQGAHIIVTPEDGIYGVQFTRDTIYPY 97

  Fly   137 -------------CEFAEEAENGPTTKMLAELAKAYNMVIIHSILER-----DMEH----GETIW 179
                         |:..|...:.|..:.|:.|||..::.::.::.::     ...|    |...:
  Rat    98 LEDIPDPQVNWIPCDNPERFGSTPVQERLSCLAKNNSIYVVANMGDKKPCNTSDSHCPPDGRFQY 162

  Fly   180 NTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYG--RHHPQN 242
            ||.||..:.|:.:.::.|.::    ...|..:..........|:|.|||..:..|:.  .|.|..
  Rat   163 NTDVVFDSRGKLVARYHKQNL----FMGEEQFNAPPEPEVVTFDTPFGKFGIFTCFDILFHDPAV 223

  Fly   243 WMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNA-AI--------ANSYFTVPINRVGTEQFPNE 298
            .::.......|:| |:|.:..|.. |.:||..:| ||        ||.:  :|:.|:        
  Rat   224 TLVTEFQVDTILF-PTAWMDVLPH-LAAIEFHSAWAIGMGVNFLAANLH--IPLRRM-------- 276

  Fly   299 YTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSR-DKDG-LLVVELD 344
              :|.|               :.|||..|.....| .::| ||:.:||
  Rat   277 --TGSG---------------IYAPDSPRAFHYDRKTQEGKLLLAQLD 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 ML_beta-AS 9..372 CDD:143611 65/308 (21%)
Vnn1NP_001020794.1 biotinidase_like 27..324 CDD:143591 65/308 (21%)
Vanin_C 338..484 CDD:465946
Blue background indicates that the domain is not in the aligned region.

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