DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd3 and nft-1

DIOPT Version :10

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_499556.1 Gene:nft-1 / 176628 WormBaseID:WBGene00003594 Length:440 Species:Caenorhabditis elegans


Alignment Length:306 Identity:73/306 - (23%)
Similarity:117/306 - (38%) Gaps:54/306 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAW---------TMPFAFCTREKFPWCEFAEEAEN 145
            :||..:|    .|.||:.|.|..|.:|...|.:         .:..|..|.     ||:.|:   
 Worm    28 LEKNFQA----AKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-----CEYMEK--- 80

  Fly   146 GPTTKMLAELAKAYNM-VIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNH-----IPRVG 204
                  ..|||:.:|: :.:..:..:|.......|||.::|.:.|....::.|.|     ||...
 Worm    81 ------YRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKV 139

  Fly   205 DFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLW 269
            ...||.:...|....|..:|..|:|.::|||....|:..:.....||:::..|||.........|
 Worm   140 RLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204

  Fly   270 SIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRD 334
            ....|..||.|..:.|...:.|               ||......||.|.|..|.|:.....|..
 Worm   205 ETLLRARAIENQCYVVAAAQTG---------------AHNPKRQSYGHSMVVDPWGAVVAQCSER 254

  Fly   335 KDGLLVVELDL---NLCRQVKDFWGFRMTQRVPLYAESFKKASEHG 377
            .| :...|:||   :..|:::..:..|.:....|:..  :|:||.|
 Worm   255 VD-MCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHIN--EKSSETG 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 ML_beta-AS 9..372 CDD:143611 69/299 (23%)
nft-1NP_499556.1 nit 17..281 CDD:143596 67/286 (23%)
FHIT 300..418 CDD:238606
Blue background indicates that the domain is not in the aligned region.

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