DRSC/TRiP Functional Genomics Resources

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Protein Alignment pyd3 and upb1

DIOPT Version :9

Sequence 1:NP_649732.1 Gene:pyd3 / 40916 FlyBaseID:FBgn0037513 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001120264.1 Gene:upb1 / 100145317 XenbaseID:XB-GENE-976127 Length:383 Species:Xenopus tropicalis


Alignment Length:383 Identity:251/383 - (65%)
Similarity:298/383 - (77%) Gaps:1/383 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFELKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTAREEQT 67
            |.||::|...||||:|.|:||||.|:||| ::.:.|.||.||...|.:.|||::||.|.|.:|||
 Frog     2 AGELESLEKLLEKHIPSDDLKEVWRLLYG-KQIRPLNLPNSASQAASKEGFDLQGYLFEAAQEQT 65

  Fly    68 RKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTRE 132
            |:.|.||||.|||.|.:|||.|:.:|..|:..::..:::.||..|.||||.||||:|||||||||
 Frog    66 RRPRTVRVGLIQNKIQLPTTEPVTEQISALHRRIAEIVEVAATCGVNIVCFQEAWSMPFAFCTRE 130

  Fly   133 KFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRK 197
            |.||.||||.||:|.|||...||||.:||||:..|||||..||:|:|||||:|||:|..:||.||
 Frog   131 KLPWTEFAESAEDGMTTKFCQELAKKHNMVIVSPILERDSVHGDTLWNTAVIISNTGAVMGKSRK 195

  Fly   198 NHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIG 262
            ||||||||||||||||||||||.||:|.|||:|||||||||||.||.|:.:|||||:||||||||
 Frog   196 NHIPRVGDFNESTYYMEGNTGHRVFQTAFGKIAVNICYGRHHPLNWFMYSMNGAEIIFNPSATIG 260

  Fly   263 RLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSR 327
            .|||.||.||||||||||..||..|||||||.|.||:|||||.|||.:||.|||||||:||||||
 Frog   261 ELSESLWPIEARNAAIANHCFTCSINRVGTEHFENEFTSGDGKKAHHDFGHFYGSSYVSAPDGSR 325

  Fly   328 TPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKE 385
            :|.|||.:|||||.|:|||||||..|.|.|:||.|..:|||...||::..|||.||:|
 Frog   326 SPGLSRVRDGLLVAEMDLNLCRQTSDKWNFKMTGRYEMYAEELTKATQPDFKPNIIRE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pyd3NP_649732.1 PLN00202 9..385 CDD:177792 247/375 (66%)
ML_beta-AS 9..372 CDD:143611 240/362 (66%)
upb1NP_001120264.1 ML_beta-AS 15..370 CDD:143611 236/355 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 416 1.000 Domainoid score I659
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9471
Inparanoid 1 1.050 524 1.000 Inparanoid score I1225
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D300920at33208
OrthoFinder 1 1.000 - - FOG0006264
OrthoInspector 1 1.000 - - oto104730
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4546
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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