DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2616 and Slc25a45

DIOPT Version :10

Sequence 1:NP_649731.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_008758401.1 Gene:Slc25a45 / 689625 RGDID:1589953 Length:292 Species:Rattus norvegicus


Alignment Length:319 Identity:69/319 - (21%)
Similarity:122/319 - (38%) Gaps:70/319 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PLDVIKTRMQSQQSPAHKCFFYSNGLMDHLFASGPNGSELASLRQRPQFSSSWDALMKISRHEGL 174
            |.|.:|.|:|:|.:                                  :....|.::|..|||.:
  Rat    26 PFDTVKVRLQTQNT----------------------------------YQGIVDCVVKTYRHESV 56

  Fly   175 AALWSGLG-PTLVSALPSTIIYFVAYEQFKARYLQIYESHYNKSQEPRHLEIRDTKKSLPSVVPM 238
            ...:.|:. |....||.:::::.|......|  |........::|.|.:..|            .
  Rat    57 LGFFKGMSFPIASVALVNSVLFGVY
SNTLLA--LTATSHQERRAQPPSYTNI------------F 107

  Fly   239 MSGVTARICAVTVVSPIELVRTKMQAQRQTYAQM----------LQFVRSVVALQGVWGLWRGLR 293
            ::|.|..:.....::|.:|::.::|.|.:...|:          :....|::..:|..||:||..
  Rat   108 IAGCTGGLLQAYCLAPFDLIKVRLQNQTEPRMQIGSSTPRYRGPVHCAASILKEEGPQGLFRGSW 172

  Fly   294 PTILRDVPFSGIYWPIYESL-KQNLGHGSQPSFSLSFLAGVMAGTVAAIVTTPFDVVKTHEQIEF 357
            ..:|||.|..|:|:..||.| :|....|..||.:...:||..||..:.|..|||||:|:..|:: 
  Rat   173 ALVLRDTPTLGMYFVTYEGLCRQYTPEGQNPSSATVLVAGGFAGIASWITATPFDVIKSRMQMD- 236

  Fly   358 GERVIFTDSPARDFGKKSTFSRLTGIYRTHGVRGLFAGCGPRLLKVAPACAIMISTFEY 416
                   ....|.:|  .....:...:|..|:...|.|......:..|..|....::||
  Rat   237 -------GLKGRKYG--GMLDCMASSFRQEGIGVFFKGMTLNSARAFPVNAATFLSYEY 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2616NP_649731.1 Mito_carr 86..207 CDD:395101 17/97 (18%)
Mito_carr 230..321 CDD:395101 23/101 (23%)
Mito_carr 321..425 CDD:395101 24/96 (25%)
Slc25a45XP_008758401.1 Mito_carr 12..81 CDD:395101 15/88 (17%)
Mito_carr 99..190 CDD:395101 22/102 (22%)
Mito_carr 201..292 CDD:395101 24/96 (25%)

Return to query results.
Submit another query.