DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2616 and GC1

DIOPT Version :10

Sequence 1:NP_649731.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:341 Identity:96/341 - (28%)
Similarity:149/341 - (43%) Gaps:74/341 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QIRPLQQVISACTGAMITACFMTPLDVIKTRMQSQQSPAHKCFFYSNGLMDHLFASGPNGSELAS 151
            |...|.::|:.....:|....:.|||::|||:|:||                   .||||..:  
  Fly    18 QFALLPKIINGGIAGIIGVTCVFPLDLVKTRLQNQQ-------------------IGPNGERM-- 61

  Fly   152 LRQRPQFSSSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQFKARYLQIYESHYNK 216
                  ::|.:|...|..:.||...::.|.|..::...|...|...|.:.|              
  Fly    62 ------YNSMFDCFRKTYKAEGYFGMYRGSGVNILLITPEKAIKLTANDYF-------------- 106

  Fly   217 SQEPRH-LEIRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVRTKMQ-AQRQTYAQML------ 273
                || |..:|.|  ||....|::|..|....:.|.:|:||::.:|| |.|...|..|      
  Fly   107 ----RHKLTTKDGK--LPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAGRVAAAAKLAGKTVE 165

  Fly   274 -----QFVRSVVALQGVWGLWRGLRPTILRDVPFSGIYWPIYESL-----KQNLGHGSQPSFSLS 328
                 |....::..:|::||::|:..|.||||.||.||:|::.:|     ::|.|.| :..|..|
  Fly   166 KVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFATLNDLGPRRNDGSG-EAVFWCS 229

  Fly   329 FLAGVMAGTVAAIVTTPFDVVKTHEQIEFGERVIFTDSPARDFGKKSTFSRLTGIYRTHGVRGLF 393
            ||||:.||:.||:...|||||||..|      .|......::|  |.....:|...:..|....|
  Fly   230 FLAGLAAGSTAALAVNPFDVVKTRLQ------AIKKADGEKEF--KGISDCITKTLKHEGPTAFF 286

  Fly   394 AGCGPRLLKVAPACAI 409
            .|...|::.:||...|
  Fly   287 KGGLCRMIVIAPLFGI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2616NP_649731.1 Mito_carr 86..207 CDD:395101 28/119 (24%)
Mito_carr 230..321 CDD:395101 33/107 (31%)
Mito_carr 321..425 CDD:395101 29/89 (33%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 89/312 (29%)

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