DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2616 and Shawn

DIOPT Version :9

Sequence 1:NP_001287212.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster


Alignment Length:362 Identity:218/362 - (60%)
Similarity:272/362 - (75%) Gaps:7/362 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SKSSHRKLLSDPRFQIRPLQQVISACTGAMITACFMTPLDVIKTRMQSQQSP--AHKCFFYSNGL 135
            |::..:..::||||:|||||||.|||||||:||||||||||||||:|:||..  ::|||.|.|||
  Fly    22 SQNPSKATMTDPRFRIRPLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGL 86

  Fly   136 MDHLFASGPNGSELASLRQRPQFSSSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYE 200
            |||:...||:....|:.:..|:||.:.||.:||||.||:.:|||||.|||:||||||||||||||
  Fly    87 MDHICPCGPDTPNPAAAKPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYE 151

  Fly   201 QFKARYLQIYESHYNKSQEPRHLEIRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVRTKMQAQ 265
            |||||:..|   ||..::.|..: ..|....:|.:||:::||:.||.|||.|||:||:|||||:|
  Fly   152 QFKARFTDI---HYKYTRRPDTI-AHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQ 212

  Fly   266 RQTYAQMLQFVRSVVALQGVWGLWRGLRPTILRDVPFSGIYWPIYESLKQNLGHGSQPSFSLSFL 330
            |.|:|:|...:|.||..|||.||||||.||||||||||||||..||.||.:.| ..:|:||.||.
  Fly   213 RMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYEYLKSSFG-VVEPTFSFSFA 276

  Fly   331 AGVMAGTVAAIVTTPFDVVKTHEQIEFGERVIFTDSPARDFGKKSTFSRLTGIYRTHGVRGLFAG 395
            ||.::|:|||.:|||||||||||||||||:.||:|:|.:....||...||..|||..||..:|:|
  Fly   277 AGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSG 341

  Fly   396 CGPRLLKVAPACAIMISTFEYSKSFFFHYNVRHHNEA 432
            .||||.|||||||||||:|||.||||:|||:..||.:
  Fly   342 LGPRLFKVAPACAIMISSFEYGKSFFYHYNIDQHNRS 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2616NP_001287212.1 Mito_carr 86..207 CDD:278578 83/122 (68%)
Mito_carr 230..321 CDD:278578 56/90 (62%)
Mito_carr 321..425 CDD:278578 66/103 (64%)
ShawnNP_001027071.1 Mito_carr 39..159 CDD:278578 80/119 (67%)
Mito_carr 178..265 CDD:278578 55/86 (64%)
Mito_carr 268..371 CDD:278578 66/102 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438218
Domainoid 1 1.000 64 1.000 Domainoid score I3661
eggNOG 1 0.900 - - E1_KOG0761
Homologene 1 1.000 - - H6040
Inparanoid 1 1.050 153 1.000 Inparanoid score I1691
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm6545
orthoMCL 1 0.900 - - OOG6_101405
Panther 1 1.100 - - P PTHR45760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2199
SonicParanoid 1 1.000 - - X1001
1211.820

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