DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2616 and Slc25a40

DIOPT Version :9

Sequence 1:NP_001287212.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001380639.1 Gene:Slc25a40 / 296813 RGDID:1308774 Length:337 Species:Rattus norvegicus


Alignment Length:356 Identity:150/356 - (42%)
Similarity:216/356 - (60%) Gaps:44/356 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PRFQIRPLQQVISACTGAMITACFMTPLDVIKTRMQSQQS--PAHKCFFYSNGLMDHLFASGPNG 146
            |..|:.||||::::|.||::|:..:|||||:|.|:|:|.:  |..|||.||||||||:... ...
  Rat    10 PTIQVTPLQQMMASCAGAVVTSLMVTPLDVVKIRLQAQNNPFPKGKCFLYSNGLMDHICIC-EEE 73

  Fly   147 SELASLRQRPQFSSSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQFKARYLQIYE 211
            |:.|..::...|..:.||.:||.|:||:.:|||||.||||.|:|:|:|||..|||.         
  Rat    74 SKKAWYKKPGNFHGTLDAFLKIVRNEGIKSLWSGLPPTLVMAVPATVIYFTCYEQL--------- 129

  Fly   212 SHYNKSQEPRHLEIRDTKKSLPSVVPMMSGVTARICAVTVVSPIELVRTKMQAQRQTYAQMLQFV 276
            |.:.|::    |...:|:      :|:::|:.||..|||::||:||:|||||::..:|.::.|.|
  Rat   130 STFLKTK----LGENETR------IPIVAGIVARFGAVTMISPLELIRTKMQSKTFSYKELYQIV 184

  Fly   277 RSVVALQGVWGLWRGLRPTILRDVPFSGIYWPIYESLKQNLGHGS---QPSFSLSFLAGVMAGTV 338
            ...|:..|...||:|..||||||||||.:||..||:|::.|...|   :.:|.::|.||.::|:.
  Rat   185 SMKVSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLRRWLCEKSDLYESTFMINFTAGALSGSF 249

  Fly   339 AAIVTTPFDVVK--------THEQIEFGERVIFTDSPARDFGKKSTFSRLTGIYRTHGVRGLFAG 395
            ||:.|.||||||        |||..:|.|.:           ..||:|.:..|....|..|||.|
  Rat   250 AAVATLPFDVVKTQKQTQLWTHEYCKFPEPL-----------DMSTWSIMKNIVADRGFSGLFTG 303

  Fly   396 CGPRLLKVAPACAIMISTFEYSKSFFFHYNV 426
            ..|||:|:.||||||||::|..|.||...||
  Rat   304 LIPRLVKIVPACAIMISSYELGKGFFQQQNV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2616NP_001287212.1 Mito_carr 86..207 CDD:278578 58/122 (48%)
Mito_carr 230..321 CDD:278578 40/90 (44%)
Mito_carr 321..425 CDD:278578 45/114 (39%)
Slc25a40NP_001380639.1 Mito_carr 13..137 CDD:395101 60/137 (44%)
Solcar 1 14..132 58/127 (46%)
Solcar 2 140..224 40/89 (45%)
Mito_carr 146..229 CDD:395101 39/82 (48%)
Mito_carr 232..330 CDD:395101 43/108 (40%)
Solcar 3 234..328 42/104 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4669
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6040
Inparanoid 1 1.050 288 1.000 Inparanoid score I2735
OMA 1 1.010 - - QHG53824
OrthoDB 1 1.010 - - D1007936at2759
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm9100
orthoMCL 1 0.900 - - OOG6_101405
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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