DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Est3 and Nceh1

DIOPT Version :10

Sequence 1:NP_524267.2 Gene:alpha-Est3 / 40907 FlyBaseID:FBgn0015571 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001120996.1 Gene:Nceh1 / 294930 RGDID:1311104 Length:408 Species:Rattus norvegicus


Alignment Length:457 Identity:85/457 - (18%)
Similarity:143/457 - (31%) Gaps:184/457 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PLP---VEPWS-QPLDCTKPGQK-------PLQFNHY-----------------SKQLEGVEDCL 83
            |||   .:||. ..||.|..|.:       .|..:|:                 |.....|.|..
  Rat    22 PLPSAVSDPWKLMLLDATFRGAQQVSNLIHSLGLSHHLITLNFIIISFGKKSARSSPRVKVTDTD 86

  Fly    84 YLNVYAKELDSPRPLP------LIVFFFGGGFEKGDP------------TKELHSPDYFMMRDVV 130
            :..|..:..:.| |.|      .:|:..|||:.....            .:||::         |
  Rat    87 FDGVEVRVFEGP-PKPDEPLRRSVVYIHGGGWALASAKISYYDQLCTAMAEELNA---------V 141

  Fly   131 VVTVSYRVGPLGFLSLNDPAVGVPGNAGLKDQLLAMEWI--KENAERFNGDPKNVTAFGESAGAA 193
            :|::.||:         .|.|..|..  :.|.:.|.::.  .|..:::..||..|...|:|||  
  Rat   142 IVSIEYRL---------VPQVYFPEQ--IHDVIRATKYFLQPEVLDKYKVDPGRVGVSGDSAG-- 193

  Fly   194 SVHYLMLNPKAEGLFHKAILQSGNVLCSWALCTIKNLPHRLAVNLGMESAEHVTDAMVLDFLQKL 258
                                  ||                ||..||.:.      ..|.....||
  Rat   194 ----------------------GN----------------LAAALGQQF------TYVESLKNKL 214

  Fly   259 PGEKLVRPYLLSAEEHLDDCVFQFGPMVEPYKTEHCALPNHPQELLDKAW-----GN----RIPV 314
            ..:.|:.|.|.:.:.:            .|...:....|..|:.::.:.|     ||    ...:
  Rat   215 KLQALIYPVLQALDFN------------TPSYQQSMNTPILPRHVMVRYWVDYFKGNYDFVEAMI 267

  Fly   315 LMSGTSFE---GLLMYARVQMAPYLLTSLKKEPEHML----PLDVKRNLPQALARHLGQRLQETH 372
            :.:.||.:   ...:.||:.....|.:|:||..:.:|    ...:.:.:||.|            
  Rat   268 VNNHTSLDVERAAALRARLDWTSLLPSSIKKNYKPVLQTIGDARIVKEIPQLL------------ 320

  Fly   373 FGGNDPSAMSP-----ESLKAY-------CEYASYKVFWHPILK----TLRSRVKSSSASTYLYR 421
                 .:|.||     |.|:|.       ||        |.:|:    ....|::|:..:..|..
  Rat   321 -----DAAASPLIAEQEVLQALPKTYILTCE--------HDVLRDDGIMYAKRLESAGVNVTLDH 372

  Fly   422 FD 423
            |:
  Rat   373 FE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Est3NP_524267.2 alpha/beta hydrolases 2..535 CDD:473884 85/457 (19%)
Nceh1NP_001120996.1 Abhydrolase_3 109..381 CDD:400284 67/369 (18%)
Involved in the stabilization of the negatively charged intermediate by the formation of the oxyanion hole. /evidence=ECO:0000250|UniProtKB:Q5NUF3 113..115 0/1 (0%)

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