DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and TUB3

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_013582.1 Gene:TUB3 / 854915 SGDID:S000004593 Length:445 Species:Saccharomyces cerevisiae


Alignment Length:451 Identity:330/451 - (73%)
Similarity:383/451 - (84%) Gaps:7/451 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-KTVGGGDDSFNTFFSETGAGKHVPR 64
            |||.|||:|||||.||||||||||.|||||:.||.:... ....||::.|:|||.|||.||.|||
Yeast     1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPR 65

  Fly    65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            |::|||||.|:||||||.:::||||||||.|||||||||||||||:|:||||.|.:||||:||||
Yeast    66 AIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQC 130

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTT 194
            .||||||..||.|||||||..|||:|.||.:||||||||||||||||:||:||||||::||||||
Yeast   131 DGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHTT 195

  Fly   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            |||:||.||||||||||||:|||.|.||:::|||.||.|::||:||||||||:|||||.||||||
Yeast   196 LEHADCTFMVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDLNEFQTNL 260

  Fly   260 VPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVV 324
            |||||||||||:|||::|.::|.||..||:|||||||||.|||||.||..|||||.|:|||||||
Yeast   261 VPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVV 325

  Fly   325 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
            .:||..|:..:|.|:|:|.|||||||||:||.|:||:|:|..:||.|.|||||||||||||:||.
Yeast   326 TRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWK 390

  Fly   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |:|.|||||||||||||||||||||||||:||||||||||:||.|||.||      .|||:
Yeast   391 RIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDYIEVGADS------YAEEF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 325/438 (74%)
TUB3NP_013582.1 alpha_tubulin 2..436 CDD:276955 321/433 (74%)

Return to query results.
Submit another query.