DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and TUB1

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_013625.1 Gene:TUB1 / 854889 SGDID:S000004550 Length:447 Species:Saccharomyces cerevisiae


Alignment Length:446 Identity:335/446 - (75%)
Similarity:379/446 - (84%) Gaps:1/446 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-KTVGGGDDSFNTFFSETGAGKHVPR 64
            |||.|||:|||||.||||||||||.|||||:|||.:... ....||::.|:|||.|||.||.|||
Yeast     1 MREVISINVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPR 65

  Fly    65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            |::|||||.|:||||.|.|:.||||||||:|||||||||||||||:|:||:..||||||||||||
Yeast    66 AIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQC 130

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTT 194
            .||||||..||.|||||||..|||:|.||.:|||||||||||||||||||:||||||::||||||
Yeast   131 DGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTT 195

  Fly   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            |||:||.||||||||||:|:|||||.||::.|||.||.|:|||:||||||||:|||||.||||||
Yeast   196 LEHADCTFMVDNEAIYDMCKRNLDIPRPSFANLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNL 260

  Fly   260 VPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVV 324
            |||||||||||:|:||:|..||:||..||:|||||||||.|||||.|||.|||||.|:|||||||
Yeast   261 VPYPRIHFPLVSYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVV 325

  Fly   325 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
            .:||..|:..:|.|:|:|.|||||||||:||.|:|||..|...||.|.||||||||||:|||||.
Yeast   326 TRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWK 390

  Fly   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
            |:|.|||||||||||||||||||||||||:||||||||||:||.|||.||...|.|
Yeast   391 RIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDYIEVGADSYAEEEE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 331/438 (76%)
TUB1NP_013625.1 alpha_tubulin 2..436 CDD:276955 327/433 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 339 1.000 Domainoid score I156
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69045
Inparanoid 1 1.050 705 1.000 Inparanoid score I91
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - mtm9173
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
TreeFam 00.000 Not matched by this tool.
1211.870

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