DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and TUB5

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_564101.1 Gene:TUB5 / 838590 AraportID:AT1G20010 Length:449 Species:Arabidopsis thaliana


Alignment Length:445 Identity:181/445 - (40%)
Similarity:274/445 - (61%) Gaps:9/445 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |||.:.|..||.|.|||:..||:.|.||||...|:...| |.....:..|.:::|...|::||||
plant     1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRA 64

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            |.:||||..:|.:|:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.|||.:||.|:.|.
plant    65 VLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 129

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            .||||.:.||.|||||||..:||:.::..:|..:..|.|:|:|:|:||..||||||:.|:.|..:
plant   130 CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 194

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |::|...::||||:||||.|.|.:..|::.:||.||...:|.:|.||||.|.||.||.:...||:
plant   195 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLI 259

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            |:||:||.:|.:||:.|.....:..|:|.|:|...::..|.|...|||||:|:....::||.:..
plant   260 PFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMST 324

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            |:|:..|..|:.|.:..||:|.|...|..:...||        ..::.|...:.|:|:|.|.:.|
plant   325 KEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRR 381

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGE 445
            :..:|..|:.::||:|||.||||:|.||:||..::..|..:|::....:.|.|||
plant   382 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEGE 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 177/437 (41%)
TUB5NP_564101.1 PLN00220 1..431 CDD:215107 177/438 (40%)

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