DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and TUB4

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_199247.1 Gene:TUB4 / 834459 AraportID:AT5G44340 Length:444 Species:Arabidopsis thaliana


Alignment Length:449 Identity:182/449 - (40%)
Similarity:274/449 - (61%) Gaps:11/449 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |||.:.|..||.|.|||...||:.|.||||...||...|..:  ..:..:.:|:|...||:||||
plant     1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGKYVPRA 63

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            |.:||||..:|.:|:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|.|||.:||.|:...
plant    64 VLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSD 128

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            .||||.:.||.|||||||..:||:.::..:|..:..:.|:|:|:|:||..||||||:.|:.|..:
plant   129 CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLV 193

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |::|...::||||:||||.|.|.:..||:.:||.||...:|.:|..|||.|.||.||.:...||:
plant   194 ENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI 258

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            |:||:||.:|.:||:.|.....:..|||.|:|...::..|.|...|||||:|:....::||.:..
plant   259 PFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLST 323

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            |:|:..:..|:.|.:..||:|.|...|..:    ..:.|.|    ::.|...:.|:|:|.|.:.|
plant   324 KEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRR 380

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
            :..:|..|:.::||:|||.||||:|.||:||..::..|..:|::. .|:..||.|..||
plant   381 VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY-QDATAGEEEYEEE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 176/437 (40%)
TUB4NP_199247.1 PLN00220 1..431 CDD:215107 177/440 (40%)

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