DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and TUBB1

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_110400.1 Gene:TUBB1 / 81027 HGNCID:16257 Length:451 Species:Homo sapiens


Alignment Length:435 Identity:173/435 - (39%)
Similarity:256/435 - (58%) Gaps:12/435 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD-DSFNTFFSETGAGKHVPR 64
            |||.:.|.:||.|.|||...||:...||||...|   ||:...... :..:.:::|....|:|||
Human     1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGRKYVPR 62

  Fly    65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            ||.|||||..:|.:|:.....||.|:..:.|...|.||:|:||||.|.|:::.||:.:|..::.|
Human    63 AVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVVRHESESC 127

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTT 194
            ..||||.|.||.|||||||..:|||.::..:|..:....|:|.|:|:||..||||||::|:.|..
Human   128 DCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNAVLSIHQL 192

  Fly   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            :|::|..|.:||||:||||.|.|.:..|||.:||.|:...:|.||.||||.|.||.||.:...|:
Human   193 IENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNM 257

  Fly   260 VPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVV 324
            ||:||:||.:..:||:.:.....:..|||||:|...|:..|.|...|.|.|:|:....::||.:.
Human   258 VPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMS 322

  Fly   325 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
            .|:|:..:.:::|:.:..||:|.|...||.:...||        ..:..|...:.|.|||.|.:.
Human   323 TKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPP--------RGLSMAATFIGNNTAIQEIFN 379

  Fly   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
            |:...|..|:.::||||||..|||:..||.||..::..|..:|::
Human   380 RVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVSEYQQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 173/435 (40%)
TUBB1NP_110400.1 PTZ00010 1..428 CDD:240228 173/435 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..451
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.