DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and TUBG1

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_024306672.1 Gene:TUBG1 / 7283 HGNCID:12417 Length:538 Species:Homo sapiens


Alignment Length:532 Identity:140/532 - (26%)
Similarity:243/532 - (45%) Gaps:113/532 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|..:.||.:.....::||||
Human     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            .:||||.|:..:....|.:|::||.:...:.  .|.||:|.| ::.|::|.:.:.|.|.:.||..
Human    66 LLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....::|:| ..::|..||:||||:||...
Human   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|:::.:|:|:..|:|:.|.:||:.|.:|.||.....:
Human   195 LTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHFPLVTYAPV------------------------------------------------ 275
            |:|.||:||.:..|.|:                                                
Human   260 LIPTPRLHFLMTGYTPLTTDQSVRAAFSVPGQAGPGPNRPCPSLSLFPTAPGATLCGPQGAALRD 324

  Fly   276 ----------------------------------------ISAEKAYHEQLSVAEITNACFEPAN 300
                                                    :|.:.|...:.:|.::.....:|.|
Human   325 WHRVGDFLADLLSTLPLPLASAKEKPKGDCALSAGRVPVSLSYQVASVRKTTVLDVMRRLLQPKN 389

  Fly   301 QMVKVDPRHGK-------YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ 358
            .||..    |:       |:|...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:
Human   390 VMVST----GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRK 450

  Fly   359 PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE--- 420
            .|.:.....::.:     |::|.|:|:..:.|...::|.:..:.||:..:..|.|.:..|.|   
Human   451 SPYLPSAHRVSGL-----MMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDT 510

  Fly   421 AREDLAALEKDY 432
            :||.:..|..:|
Human   511 SREIVQQLIDEY 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 140/532 (26%)
TUBG1XP_024306672.1 gamma_tubulin 3..522 CDD:276957 139/530 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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