DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and Tube1

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_082282.1 Gene:Tube1 / 71924 MGIID:1919174 Length:475 Species:Mus musculus


Alignment Length:483 Identity:149/483 - (30%)
Similarity:240/483 - (49%) Gaps:74/483 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSE-----TGAGK 60
            |.:.:.:.|||.|.|||...|:|...||.        :....|..||:.::||..     .|.|.
Mouse     1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDDAISSFFRNVDTRAVGDGG 57

  Fly    61 HV---------PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD 116
            .:         .|||.:|:|..||:|:..|..|.:|..:||||....:.||:|.||...|....:
Mouse    58 SISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYRE 122

  Fly   117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAV 181
            .:|:::||.|:||..||.|.|.||.|||||||..:.|::.|..::.:..:...||||:.: ...:
Mouse   123 QILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSE-DDVI 186

  Fly   182 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI--------------------------- 219
            ..||||:|......||:||...:||::::||..: :|:                           
Mouse   187 TSPYNSMLAMKELNEHADCVLPIDNQSLFDIISK-IDLVVNSGKLGSAVKPKSLITSNMGAVKKH 250

  Fly   220 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF------PLVTYAPVISA 278
            .:..:..:|.::..::.|:|:|.||:|:||:||.|...||||:|::|:      ||.|.|.|...
Mouse   251 HKKPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIP 315

  Fly   279 EKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 343
            .:...:..|.|      |...:|:::.||||..|:||.::.||:|...|:...|..:|.  .:||
Mouse   316 PRRLDQMFSDA------FSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKP--ALQF 372

  Fly   344 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 408
            |.|...|:|..:...||.    |.    ..::..|:|.|.:...:..|..:|..:|.|:|.:|.|
Mouse   373 VSWNQEGWKTSLCSVPPV----GH----SHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHY 429

  Fly   409 VG-EGMEEGEFSEAREDLAALEKDYEEV 435
            :. :||||..|:||...|:||.::|.::
Mouse   430 LQVDGMEESTFTEAVSSLSALIQEYSDL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 149/483 (31%)
Tube1NP_082282.1 epsilon_tubulin 2..457 CDD:276959 148/480 (31%)

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