DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and Tubg2

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_038942746.1 Gene:Tubg2 / 680991 RGDID:1585798 Length:477 Species:Rattus norvegicus


Alignment Length:418 Identity:124/418 - (29%)
Similarity:228/418 - (54%) Gaps:27/418 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QPDGQMPSDKTVGGGDDSFNTFFSETGAG--KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
            :|| ::|||:...|.....:...:.|.|.  .::||||.:||||.|:..:...:|.:|::||.:.
  Rat    55 RPD-ELPSDRRCPGRSSPCSWASAATRADDEHYIPRAVLLDLEPRVIHSILNSSYAKLYNPENIY 118

  Fly    94 TGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156
            ..:.  .|.||:||| ::.|::|.:.:.|.|.:.||....|:||::.||..||||||..|.|:||
  Rat   119 LSEHGGGAGNNWARG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLER 182

  Fly   157 LSVDYGKKSKLEFAVYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 220
            |:..|.||....::|:| ..::|..||:||||:||.....:::||..::||.|:..|....|.|:
  Rat   183 LNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQ 247

  Fly   221 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK-AYHE 284
            .|:::.:|:|:..|:|:.|.:||:.|.:|.||.....:|:|.||:||.:..|.|:.:.:. |...
  Rat   248 NPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVR 312

  Fly   285 QLSVAEITNACFEPANQMVKVDPRHGK-------YMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 342
            :.:|.::.....:|.|.||..    |:       |:|...:.:|:|.|..|:.::..|:.::...
  Rat   313 KTTVLDVMRRLLQPKNVMVST----GRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLAN 373

  Fly   343 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 407
            |:.|.|...:|.::.:.|.:.....::.:     |::|.|:|:..:.....::|.::.:.||:..
  Rat   374 FIPWGPASIQVALSRKSPYLPSAHRVSGL-----MMANHTSISSLFESSCQQYDKLWKRGAFLEQ 433

  Fly   408 YVGEGMEEGEFSE---AREDLAALEKDY 432
            :..|.:.:..|.|   :||.:..|..:|
  Rat   434 FRKEDIFKDNFEEMDRSREVVQELIDEY 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 124/418 (30%)
Tubg2XP_038942746.1 gamma_tubulin 81..461 CDD:276957 116/389 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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