Sequence 1: | NP_524264.1 | Gene: | alphaTub84D / 40904 | FlyBaseID: | FBgn0003885 | Length: | 450 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003749686.1 | Gene: | Tubb1 / 679312 | RGDID: | 1589557 | Length: | 452 | Species: | Rattus norvegicus |
Alignment Length: | 459 | Identity: | 183/459 - (39%) |
---|---|---|---|
Similarity: | 267/459 - (58%) | Gaps: | 20/459 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
Fly 66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
Fly 131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
Fly 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
Fly 261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
Fly 326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
Fly 391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE-----VGM----DSGDGEGE- 445
Fly 446 GAEE 449 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
alphaTub84D | NP_524264.1 | PTZ00335 | 1..439 | CDD:185562 | 177/446 (40%) |
Tubb1 | XP_003749686.1 | PTZ00010 | 1..428 | CDD:240228 | 176/436 (40%) |
beta_tubulin | 2..426 | CDD:276956 | 175/433 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5023 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |