DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tuba4b

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_012825888.1 Gene:tuba4b / 549448 XenbaseID:XB-GENE-489927 Length:452 Species:Xenopus tropicalis


Alignment Length:449 Identity:424/449 - (94%)
Similarity:437/449 - (97%) Gaps:1/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            |||||:||||||||:|||||||||||||||||||||||||:|||||||.||||||||||||||||
 Frog     5 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHVPRAV 69

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            ||||||||:||||.||||||||||||||||||||||||||||||||||:|.||||||||||||||
 Frog    70 FVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTG 134

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            |||||:||||||||||||||||||||||||||||||||::|||||||||||||||||||||||||
 Frog   135 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 199

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
 Frog   200 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVP 264

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            ||||||||.||||||||||||||||||:|||||||||||||||.|||||||||||:|||||||||
 Frog   265 YPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPK 329

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |||||||.|||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
 Frog   330 DVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARL 394

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |||||||||||||||||||||||||||||||||:|||||||||||:||.:.|.|| |||
 Frog   395 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEG-EEY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 416/436 (95%)
tuba4bXP_012825888.1 PTZ00335 5..442 CDD:185562 416/436 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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