DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tuba8l4

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_956479.1 Gene:tuba8l4 / 393154 ZFINID:ZDB-GENE-040426-860 Length:450 Species:Danio rerio


Alignment Length:450 Identity:426/450 - (94%)
Similarity:438/450 - (97%) Gaps:0/450 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            ||||||:||||||.|:|||||||||||||||||||||||||:|||||||||||||||||||||||
Zfish     1 MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA 65

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            |||||||||::|||||||||||||||||||||||||||||||||.||||:||||||.||||||||
Zfish    66 VFVDLEPTVINEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTTGKEIIDLVLDRTRKLADQCT 130

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            |||||||||.|||||||||||||||||||:||||||||||||||.|||||||||||:||||||||
Zfish   261 PYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVP 325

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            ||||:|||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   326 KDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |||||||:||||||||||||||||||||||||||:|||||||||||.||...|.|..|||
Zfish   391 LDHKFDLVYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSVGEEDEEGEEY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 419/437 (96%)
tuba8l4NP_956479.1 PTZ00335 1..440 CDD:185562 420/438 (96%)
alpha_tubulin 2..435 CDD:276955 415/432 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6355
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.730

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