DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and Tubal3

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001099588.1 Gene:Tubal3 / 291287 RGDID:1305289 Length:382 Species:Rattus norvegicus


Alignment Length:390 Identity:289/390 - (74%)
Similarity:335/390 - (85%) Gaps:16/390 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
            |.:|||.||..||||||.:|:||||||:|.||.|.|..|||||||:.||||||||||||.|:   
  Rat     7 SLDTFFHETSTGKHVPRTLFMDLEPTVIDGVRVGKYHSLFHPEQLVNGKEDAANNYARGRYS--- 68

  Fly   113 EIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQV 177
                         |:||:|||||||:.||||||||||||||||||||:|.||:||||:|||:|::
  Rat    69 -------------AEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKTKLEFSVYPSPRI 120

  Fly   178 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 242
            |||||||||:|||||:|:|:|||.|||||||:|:||.|.|.:|.|:|:::||||.|::|||||||
  Rat   121 STAVVEPYNAILTTHSTIEYSDCTFMVDNEAVYNICHRKLGVEHPSYSSINRLIAQVLSSITASL 185

  Fly   243 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDP 307
            ||:|.|||||.|||||||||||||||:.|.||:|||||||.|.|||.:||.:|||.:||:||.||
  Rat   186 RFEGPLNVDLIEFQTNLVPYPRIHFPITTLAPIISAEKAYQEHLSVPDITASCFELSNQLVKCDP 250

  Fly   308 RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
            |.|||||||:||||||||||||.|||.:|::.::|||||||||||||||.||||||||||||:||
  Rat   251 RLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINCQPPTVVPGGDLARVQ 315

  Fly   373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
            ||||||||||||.||||||||||||||||:||:|||:.||||.|||.|||||||||||||||||:
  Rat   316 RAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFEEAREDLAALEKDYEEVGL 380

  Fly   438  437
              Rat   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 289/390 (74%)
Tubal3NP_001099588.1 alpha_tubulin 7..378 CDD:276955 286/386 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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