DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and atb2

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_595106.1 Gene:atb2 / 2540936 PomBaseID:SPBC800.05c Length:449 Species:Schizosaccharomyces pombe


Alignment Length:439 Identity:340/439 - (77%)
Similarity:390/439 - (88%) Gaps:0/439 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |||.|||||||||.||||||||||||||||||:|.|..:......|..|:|||||||.||:|||:
pombe     1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRS 65

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            ::|||||.|:|:||||.||.||||||||||||||:|||||||||:|||:||.|.|:||::||.|:
pombe    66 IYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCS 130

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            ||||||:||||||||||||.:||:|||:::|.|||||:|:|||||||||:|||||||:||||.||
pombe   131 GLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATL 195

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            :.:||.||||||:.|||||||||||||:|.||||||.|:||||||||||:|:|||||.|||||||
pombe   196 DLADCTFMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLV 260

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVP 325
            ||||||||||||||::||.||:||..||.||||.||||.|||||.|||.|:|||.|:||||||:|
pombe   261 PYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIP 325

  Fly   326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            :||.||:.|||.|||||||||||||||:||..:||..:.|.::|||.||||||||||:|||||:|
pombe   326 RDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSR 390

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 439
            |||||||||:|||||||||||||||||||||||||||||:||||||.||
pombe   391 LDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 338/437 (77%)
atb2NP_595106.1 PTZ00335 1..448 CDD:185562 340/439 (77%)
alpha_tubulin 2..435 CDD:276955 334/432 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 346 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69045
Inparanoid 1 1.050 727 1.000 Inparanoid score I91
OMA 1 1.010 - - QHG54134
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - mtm9275
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
TreeFam 00.000 Not matched by this tool.
1211.870

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