DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and nda2

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_596774.1 Gene:nda2 / 2539864 PomBaseID:SPBC16A3.15c Length:455 Species:Schizosaccharomyces pombe


Alignment Length:456 Identity:346/456 - (75%)
Similarity:399/456 - (87%) Gaps:7/456 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD-----KTVGGGDDSFNTFFSETGAGK 60
            |||.||:|||||||||||||||||||||||.||| .|::     |.....:|.|.|||||||.||
pombe     1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSETGQGK 64

  Fly    61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 125
            .|||:::|||||.|:|:||||.|:.||||||::||||||:|||||||||:|||::|.||:|||::
pombe    65 FVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRM 129

  Fly   126 ADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILT 190
            ||.|:||||||:|||||||||||..:||:|||:::|||||.|:|:|||||||||:|||||||:||
pombe   130 ADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLT 194

  Fly   191 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
            ||.||::|||.|||||||.|||||||||||||||.||||||.|:||||||||||.|:|||||.||
pombe   195 THATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEF 259

  Fly   256 QTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYR 320
            |||||||||||||||||:|::||.||:||..||.||||.||||.|||||.|||.|:|||.|:|||
pombe   260 QTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYR 324

  Fly   321 GDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
            |||:|:||.||:.:||::||||||||||||||:||.|:||..|||..:|||.||||||||||:||
pombe   325 GDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIA 389

  Fly   386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGE-GEGAEE 449
            |||:||||||||||:|||||||||||||||||||||||||||||:||||||.||.|.| .|..||
pombe   390 EAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMDNEMYEADEE 454

  Fly   450 Y 450
            |
pombe   455 Y 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 338/442 (76%)
nda2NP_596774.1 alpha_tubulin 2..439 CDD:276955 334/437 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 346 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69045
Inparanoid 1 1.050 727 1.000 Inparanoid score I91
OMA 1 1.010 - - QHG54134
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - mtm9275
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
TreeFam 00.000 Not matched by this tool.
1211.870

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