DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and Tubal3

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001029051.2 Gene:Tubal3 / 238463 MGIID:3588215 Length:446 Species:Mus musculus


Alignment Length:445 Identity:333/445 - (74%)
Similarity:389/445 - (87%) Gaps:9/445 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTVGGGDDSFNTFFSETG 57
            ||||:|||:||||||||:||||||||||||||||        .:.:.| |...:.|.:|||.||.
Mouse     1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPK-VEHMNASLDTFFHETR 64

  Fly    58 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 122
            |||||||.:|:||||||:|.:|.|.|..|||||||:.|||||||.||||.|::|.|:::|||:||
Mouse    65 AGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERI 129

  Fly   123 RKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNS 187
            ||||:||:|||||||:.||||||||||||||||||||:|.||.||||:|||:|::|||||||||:
Mouse   130 RKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNA 194

  Fly   188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
            |||||:|:|:|||||||||||:||||:..|.||||:|.::||||.|:.|||||||||:|.|||||
Mouse   195 ILTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDL 259

  Fly   253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCM 317
            .|||||||||||||||:...||:|||||||.|||||:::|.:|||.:||:||.|||.|||||||:
Mouse   260 IEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCL 324

  Fly   318 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 382
            ||||||||||||.|||.:|::.::|||||||||||||||||||.||||||||:||||||||||||
Mouse   325 LYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTT 389

  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGM 437
            ||.||||||||||||||||:||:|||:.||||.|||.|||||||||||||||||:
Mouse   390 AIVEAWARLDHKFDLMYAKKAFLHWYITEGMELGEFVEAREDLAALEKDYEEVGL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 333/445 (75%)
Tubal3NP_001029051.2 PTZ00335 1..443 CDD:185562 331/442 (75%)
alpha_tubulin 2..442 CDD:276955 329/440 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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