DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tba-8

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_509591.2 Gene:tba-8 / 191455 WormBaseID:WBGene00006534 Length:452 Species:Caenorhabditis elegans


Alignment Length:447 Identity:344/447 - (76%)
Similarity:388/447 - (86%) Gaps:1/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            |||:|||:||||.|||||||||||:|||:...|.:..::. .....|...||||:..|||||||:
 Worm     6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAI 69

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            :|||||||:||:|.|.|..||||:|:|.|||||||||||||||||||::|:|||||||..:.|.|
 Worm    70 YVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEG 134

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            |||||:||||||||||||:|||||||||::||||||||:|||||||||:||||||||||||||||
 Worm   135 LQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLE 199

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            .|||:||||||||||:||:.|.:|||:|:||||||.|:||||||||||||||||||.||||||||
 Worm   200 LSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVP 264

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            ||||||||.||||||||::|:||.|||.:||:.|||.||||||.||..|||||.|:|||||||||
 Worm   265 YPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPK 329

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            ||||||:::|.||.|.||||||||||||||||.|..|.|||||||.|||||||||||||||||||
 Worm   330 DVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARL 394

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAE 448
            ||||||||:|||||||:||||||||||.|||:|||||||||.||..|:.|.|.|..|
 Worm   395 DHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTADLEEENDE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 339/436 (78%)
tba-8NP_509591.2 PTZ00335 6..451 CDD:185562 343/445 (77%)
alpha_tubulin 6..438 CDD:276955 337/432 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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