DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tba-9

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_508555.2 Gene:tba-9 / 185538 WormBaseID:WBGene00006535 Length:456 Species:Caenorhabditis elegans


Alignment Length:449 Identity:379/449 - (84%)
Similarity:420/449 - (93%) Gaps:2/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|||||||||||:||||||||||||||||||.:..:.::|..|||||||||||.||||||||:
 Worm     7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAI 71

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            .||||||.:||:|||||:.|||||||:|||||||||||||||||||||:|:|:||:|:|.:.|.|
 Worm    72 MVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRG 136

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            |||||:|||||||||||||:||||||||||||||||||.:||||||||::|||||||||||||||
 Worm   137 LQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLE 201

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            ||||:|||||||||||||||||:.|||||||||||.|::||:|||||||||||||||||||||||
 Worm   202 HSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVP 266

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            ||||||||.||||:||||||||||::|||||..||||..||||.|||.|||||||:|||||||||
 Worm   267 YPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPK 331

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |||||||::||||:|||||||||||||||||||||||||.||:|:||||||||||||||||||||
 Worm   332 DVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARL 396

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |||||||||||||||||||||||||||||||||||||||||||||:|:|:.:.|  ::|
 Worm   397 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAGEPDEE--DDY 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 375/436 (86%)
tba-9NP_508555.2 PTZ00335 7..453 CDD:185562 378/447 (85%)
alpha_tubulin 7..440 CDD:276955 372/432 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I1100
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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