DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and mec-7

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_509313.1 Gene:mec-7 / 181036 WormBaseID:WBGene00003171 Length:441 Species:Caenorhabditis elegans


Alignment Length:454 Identity:189/454 - (41%)
Similarity:271/454 - (59%) Gaps:24/454 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DSFNTFFSETGAGKHV 62
            |||.:.|..||.|.|||:..||:...||||.|.||.     ||..|   :..|.:::|.|:.|:|
 Worm     1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQY-----VGDSDLQLERINVYYNEAGSNKYV 60

  Fly    63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 127
            ||||.|||||..:|.||:|.:.|||.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|:
 Worm    61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125

  Fly   128 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTH 192
            ....||||.:.||.|||||||..:||:.::..:|..:....|:|.|:|:||..||||||:.|:.|
 Worm   126 STDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190

  Fly   193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT 257
            ..:|::|..|.:||||:||||.|.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...
 Worm   191 QLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255

  Fly   258 NLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGD 322
            |:||:||:||.:..:||:.|.....:..::|.|:|..||:..|.|...|||||:|:....::||.
 Worm   256 NMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGR 320

  Fly   323 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387
            :..|:|:..:..|:.|.:..||||.|...|..:...||        ..::.:...:.|:|||.|.
 Worm   321 MSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQEL 377

  Fly   388 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMDSG-----DGE 443
            :.|:..:|..|:.::||:|||.||||:|.||:||.   .||.:..:.|:|...|..     |||
 Worm   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAFDGE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 185/443 (42%)
mec-7NP_509313.1 PLN00220 1..426 CDD:215107 183/437 (42%)
beta_tubulin 2..426 CDD:276956 182/436 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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