DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tbb-6

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_506075.2 Gene:tbb-6 / 179680 WormBaseID:WBGene00006539 Length:426 Species:Caenorhabditis elegans


Alignment Length:439 Identity:155/439 - (35%)
Similarity:243/439 - (55%) Gaps:20/439 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRA 65
            |:|.|::.|||.|.|||...||....|||:|.||....|.  |...:...:::.|....|:||||
 Worm     1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRA 63

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCT 130
            :.|||:|..::.||:..|.:||.||..::|:..|.||::||:|..|.||||.||..||:.|:...
 Worm    64 ILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAAD 128

  Fly   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 195
            .|:||.:.||.|||||||..|||:.:|..:|..|:....::.|:.:||..||||||:||:....:
 Worm   129 SLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLM 193

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            ::.|..|.:|||||:|||:.||.:| |.||.:||.|....:|.||...||.|.|..|:.:.  |.
 Worm   194 DNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NT 256

  Fly   260 VPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVV 324
            ...||:||.:.::|||........:..|::::|....:..|.|. .:...||:::..::|||...
 Worm   257 AGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQT 320

  Fly   325 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
            .|.....|.:::.:...:.::..|......:     ..:|...|   :.:...::|:|||.|...
 Worm   321 EKKDAEQIISVENEDPSEMIESLPKSTNTDV-----CDIPSRGL---KTSATFIANSTAIQEPLK 377

  Fly   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 435
            |:..:|..::.::||:|||.   |||.||::|.   .||.:..:.||:|
 Worm   378 RISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 155/439 (35%)
tbb-6NP_506075.2 PTZ00010 1..421 CDD:240228 152/435 (35%)
beta_tubulin 2..421 CDD:276956 151/434 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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