DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and tba-7

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_499463.1 Gene:tba-7 / 176568 WormBaseID:WBGene00006533 Length:444 Species:Caenorhabditis elegans


Alignment Length:451 Identity:362/451 - (80%)
Similarity:403/451 - (89%) Gaps:8/451 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG-QMPSDKTVGGGDDSFNTFFSETGAGKHVPR 64
            |||.||||||||||||||||||||||||||.||| .|..|    |...|..||||:||.|:||||
 Worm     1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPD----GNSGSLGTFFSDTGYGRHVPR 61

  Fly    65 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            ::|||||||||||:|||.|::||||||::||||||||||||||||:||||:|..|||||:||:.|
 Worm    62 SIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNC 126

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTT 194
            .|||||.:||||||||||||||:||||||.:|||||||||::|||||:||:||||||||||||||
 Worm   127 EGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTT 191

  Fly   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            ||||||:||||||||||||||||.:.||||.||||:|.|:||||||||||||||||||.||||||
 Worm   192 LEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNL 256

  Fly   260 VPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVV 324
            |||||||||||.|.|:||:  |:||.|||.|||.:|||.:|||||.||:||||||.|:|||||||
 Worm   257 VPYPRIHFPLVAYNPLISS--AHHEFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVV 319

  Fly   325 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 389
            ||||:|||.:|||:|::|||||||||||||:|||||||:||||:|||.||||||||||||||||.
 Worm   320 PKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQ 384

  Fly   390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |||:|||||||||||||||||||||||||||||||||||||||||||.|| |....|.:||
 Worm   385 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS-DANDNGDDEY 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 356/438 (81%)
tba-7NP_499463.1 PTZ00335 1..443 CDD:185562 360/448 (80%)
alpha_tubulin 2..430 CDD:276955 352/433 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.