DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tbg-1

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:465 Identity:136/465 - (29%)
Similarity:225/465 - (48%) Gaps:60/465 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
            :::||||.|.|:..|.|:....||||...||...:..:   :|..:..|.:.....:|||||.||
 Worm     8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVD 69

  Fly    70 LEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            |||.|:: .:::..:..||:.:.:.....  .|.||:|.| |..|:|:.:.::|.|.:.|:....
 Worm    70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVST-AVVEPYNSILTTHTTL 195
            |.|.|..||..||||||..|||:|||...:.||....::|:.....|| .||.|||.:|:....:
 Worm   134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLI 198

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |:.|...::||.|::.:.......:.||:.::|.|:.:|:|:.||..||:.|:...:.  ..:|.
 Worm   199 ENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIR--YLDLA 261

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV----KVDPRHGKYMACCMLYRG 321
            |:|.:||.....:||:...:.:..:.|||::|....:|.:.||    :|.|..      |||...
 Worm   262 PFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPND------CMLSAY 320

  Fly   322 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV---------PGGDLAKVQRAV-- 375
            ..:...:.|  .||.|..  |.||:...        :||..:         |.....:.|..|  
 Worm   321 MFLQGQIEA--HTIMTAE--QNVDFAIR--------RPPFYMLKPLRMMHAPLSPYVRPQYKVSG 373

  Fly   376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS--------EAREDL-----AA 427
            .:|:|:|::|..:..|..|:|.:.:||||:..:  |.::  .||        ...:||     |.
 Worm   374 LLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKID--NFSLDMMDDAMHIVQDLLDEYKAV 434

  Fly   428 LEKDYEEVGM 437
            ::|||...|:
 Worm   435 VQKDYLTRGL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 136/465 (29%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 131/450 (29%)
PLN00222 7..443 CDD:215108 135/462 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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