DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84D and betaTub60D

DIOPT Version :10

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_314483.4 Gene:betaTub60D / 1275247 VectorBaseID:AGAMI1_006233 Length:454 Species:Anopheles gambiae


Alignment Length:456 Identity:175/456 - (38%)
Similarity:268/456 - (58%) Gaps:26/456 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGD-----DSFNTFFSETGA-- 58
            |||.:.:..||.|.|||...||:...||||...|       |..|:     :..:.:::|..|  
Mosquito     1 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDASG-------VYNGESDLQLERVSVYYNEASAVS 58

  Fly    59 ----GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 119
                ||:||||:.:||||..::.||:|:|.:||.|:..:.|:..|.||:|:||||.|.|:||.||
Mosquito    59 RASGGKYVPRAILLDLEPGTMEAVRSGSYGKLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVL 123

  Fly   120 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEP 184
            |.:||..:.|..||||.:.||.|||||||..:||:.::..:|..:....::|.|:|:||..||||
Mosquito   124 DVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 188

  Fly   185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
            ||:.|:.|..:|::|..:.:||||:||||.|.|.:..|:|.:||.|:...:|.:|..|||.|.||
Mosquito   189 YNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLN 253

  Fly   250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMA 314
            .||.:...|:||:||:||.:..:||:.|.....:..|:|.|:|...|:..|.|...|||||:|:.
Mosquito   254 ADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 318

  Fly   315 CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
            ...::||.:..|:|:..:..::.|.:..||:|.|...|..:...||        ..::.:...:.
Mosquito   319 VAAVFRGRMSMKEVDEQMLAVQNKNSSYFVEWIPNNVKTAVCDIPP--------KGLKMSSTFIG 375

  Fly   380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEG 444
            |||||.|.:.|:..:|..|:.::||:|||.||||:|.||:||..::..|..:|::....:.|.|.
Mosquito   376 NTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADDEF 440

  Fly   445 E 445
            |
Mosquito   441 E 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 172/448 (38%)
betaTub60DXP_314483.4 PLN00220 1..452 CDD:215107 175/456 (38%)

Return to query results.
Submit another query.