DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and CG32396

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_729172.1 Gene:CG32396 / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster


Alignment Length:455 Identity:159/455 - (34%)
Similarity:246/455 - (54%) Gaps:27/455 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVG--GGD-----DSFNTFFSETGA 58
            |||.:::.:|.||..||::.|.:...|||:        |...|  ||.     :..|.||:.|.:
  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGV--------DYASGRFGGTSPLQLERINVFFNATAS 57

  Fly    59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 123
            .:...|.:.:|.|.:.:..:...:  ||:.||..:.|.|.|.||:|||::|.|..|:|.||:..|
  Fly    58 KRFYARTILIDTEASTIQRLNASS--QLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTR 120

  Fly   124 KLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSI 188
            :..:....||||.:.||.|||||||.|||:||.|...|.......:...|:|.:|..||||||::
  Fly   121 REVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNAL 185

  Fly   189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLT 253
            |:|...:.:|...|.:||||::.||.|||.::...|.::|.::...:|.||..|||.|.||..|.
  Fly   186 LSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR 250

  Fly   254 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCML 318
            :...|:||:||:||.:..:||:::.::....:.:|:|:....|...|.:..:|.|.||.:....:
  Fly   251 KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGI 315

  Fly   319 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
            :||.:.|::|:..:..::.|....||||.|...|..|...||        ..::.:...:.||||
  Fly   316 FRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTA 372

  Fly   384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE--VGMDSGDGEGEG 446
            |...:.||......|..::|.:|||.||||||.||.:|:::|.|:..||..  .|.|||.|.|.|
  Fly   373 IQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGGGGGG 437

  Fly   447  446
              Fly   438  437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 153/446 (34%)
CG32396NP_729172.1 PTZ00010 1..421 CDD:240228 150/437 (34%)
beta_tubulin 2..425 CDD:276956 151/440 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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