DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tubz1

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:482 Identity:109/482 - (22%)
Similarity:180/482 - (37%) Gaps:115/482 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
            |.:.|||.|.|||...|.|.|                ....|.....:||..|    :..|:.||
 Frog     4 IWLQVGQCGNQIGQEWWHLLC----------------NNASDTDRYPYFSRDG----MINAICVD 48

  Fly    70 LEPTVV----DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG----KEIVDLVLDRIRKLA 126
            .||.|:    ..|:.|:.|.    ..||.|::...||:|.|:...|    |.::...::..|...
 Frog    49 SEPKVIRKLWKRVKKGSLRD----SNLIVGRKGRGNNWAFGYSGDGTDTEKSLLARTMESFRHEL 109

  Fly   127 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTT 191
            ::.....|.::.||..||||||..:.|.|.:...|.....|..||.| .:.....::.|||:|..
 Frog   110 ERRDCYSGTVLLHSLCGGTGSGLGARLCEEIRDTYPAGHILSVAVAP-HETGDTPLQHYNSLLCL 173

  Fly   192 HTTLEHSDCAFMVDNEAIYDICRRNL-----------DIERP-TYTNLNRLIGQIVSSI---TAS 241
            .....:||...:..|:   ||..|..           .:|.| :...:|..|...::.:   |.:
 Frog   174 SWLQRYSDGILLFQND---DIMHRVAALGEKKVPLVSGVEAPVSIAAMNSHIASCLAGLLYPTNT 235

  Fly   242 LRFDGALNVDLT--EFQTNLVP-------------------YPRIHFPLVTYAPVISAEKAYHEQ 285
            ||...|::|.:.  |....|.|                   :.|:...|....|..|.:...|..
 Frog   236 LRTRSAVSVGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPFWDRVTLSLTKNIPRTSPDGRLHHS 300

  Fly   286 LSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCP-- 348
            .|:..::.|..:..                 .|...|.|         .:|.|::.:.|.|.|  
 Frog   301 TSLLAVSRASQDKP-----------------FLLSQDSV---------LMKLKQSYRCVPWNPFP 339

  Fly   349 ----TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYV 409
                ||.:   |...|        ::...::.:.:|.::.|:..:|:..:...||..||::|||.
 Frog   340 IDYWTGSQ---NILDP--------SQQSHSLTVCANHSSAADLMSRVIQRAQSMYEARAYLHWYQ 393

  Fly   410 GEGMEEGEFSEAREDLAALEKDYEEVG 436
            ..|.||.:|..|...|.::.::|.::|
 Frog   394 RYGCEEEDFQGAFHTLHSVVEEYNKLG 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 109/482 (23%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 107/477 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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