DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tuba1al

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_031749742.1 Gene:tuba1al / 100486465 XenbaseID:XB-GENE-22063596 Length:487 Species:Xenopus tropicalis


Alignment Length:445 Identity:377/445 - (84%)
Similarity:417/445 - (93%) Gaps:3/445 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.||:|||||||||||||||||||||||.|||::..|:.|...|:||:|||:||..||:||.||
 Frog    41 REVISVHVGQAGVQIGNACWELYCLEHGILPDGRLIGDEIVSEEDESFSTFFNETSGGKYVPHAV 105

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            ||||||||:||||.|.|::||||||||||.|||||||||||||||:|||||||:||||:|||||.
 Frog   106 FVDLEPTVIDEVRKGAYQKLFHPEQLITGMEDAANNYARGHYTIGREIVDLVLERIRKMADQCTA 170

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            |||||||||||||||||||||||||||||||:||||||::||:|::|||||||||||||||.|||
 Frog   171 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGRKSKLEFSIYPSPKMSTAVVEPYNSILTTHATLE 235

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            ||||||:||||||||||:|||||||||::|||||||||||||||||||||||||||.||||||||
 Frog   236 HSDCAFLVDNEAIYDICQRNLDIERPTHSNLNRLIGQIVSSITASLRFDGALNVDLAEFQTNLVP 300

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            :||||||:::||||||||:||||:||:||||.||||..|||||.|||||||||||:|||||||||
 Frog   301 FPRIHFPVISYAPVISAERAYHEKLSIAEITTACFESTNQMVKCDPRHGKYMACCLLYRGDVVPK 365

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |||.|||:||::|||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   366 DVNVAIASIKSRRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 430

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG---MDSGDGE 443
            |||||||||||||||||||||||||||||||||:|||||||:|:.   ::..|||
 Frog   431 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYDEIASEYVEEEDGE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 374/439 (85%)
tuba1alXP_031749742.1 PTZ00335 41..476 CDD:185562 374/434 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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