DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tuba1l

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_031749744.1 Gene:tuba1l / 100144986 XenbaseID:XB-GENE-5845222 Length:486 Species:Xenopus tropicalis


Alignment Length:447 Identity:374/447 - (83%)
Similarity:416/447 - (93%) Gaps:1/447 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.||:|||||||||||||||||||||||.|||::.|| .....|:||:|||:||..||:||.||
 Frog    40 REVISVHVGQAGVQIGNACWELYCLEHGILPDGRLLSD-MFSEEDESFSTFFNETSGGKYVPHAV 103

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            ||||||||:||||.|:||:||||||||:||||||||||||||||||||:|.||:||||:||||..
 Frog   104 FVDLEPTVIDEVRKGSYRKLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLERIRKMADQCNA 168

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            ||||||||||||||||||:|||||||||:||:||||:|::||||::|||||||||||||||||||
 Frog   169 LQGFLIFHSFGGGTGSGFSSLLMERLSVEYGRKSKLQFSIYPAPKMSTAVVEPYNSILTTHTTLE 233

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            ||||||:||||||||||:||||||.||:|||||||.||||||||||||||||||||.||||||||
 Frog   234 HSDCAFLVDNEAIYDICQRNLDIECPTHTNLNRLIAQIVSSITASLRFDGALNVDLAEFQTNLVP 298

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            :||||||:|:|||.||||:||||:||:||||:|||||||||||.:||:|||||||||||||||||
 Frog   299 FPRIHFPVVSYAPFISAERAYHEKLSIAEITSACFEPANQMVKCNPRNGKYMACCMLYRGDVVPK 363

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |||.|||:||:||||||||||||||||||||||||||||||.|::||||||||||||||||||.|
 Frog   364 DVNVAIASIKSKRTIQFVDWCPTGFKVGINYQPPTVVPGGDQAQMQRAVCMLSNTTAIAEAWAHL 428

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAE 448
            |||||||||||||||||||||||||||||||||:|||||||||:..|..:.|.:|.|
 Frog   429 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIACDYVEEEEDGEE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 370/436 (85%)
tuba1lXP_031749744.1 alpha_tubulin 40..472 CDD:276955 369/432 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11588
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.110

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