DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84D and tuba8

DIOPT Version :9

Sequence 1:NP_524264.1 Gene:alphaTub84D / 40904 FlyBaseID:FBgn0003885 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001090799.1 Gene:tuba8 / 100037894 XenbaseID:XB-GENE-491247 Length:456 Species:Xenopus tropicalis


Alignment Length:449 Identity:388/449 - (86%)
Similarity:411/449 - (91%) Gaps:1/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            |||||:|:||||:|||||||||:||||||||||.:.....||...|||.|||||:..|||||||:
 Frog     9 RECISVHIGQAGLQIGNACWELFCLEHGIQPDGILSDQSKVGSSADSFTTFFSESSNGKHVPRAI 73

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            .||||.||.||:|.|.||.|||||..||.|||||||||||||||||||:|||||:|||..|.|:.
 Frog    74 LVDLETTVADEIRVGEYRHLFHPEHFITSKEDAANNYARGHYTIGKEIIDLVLDQIRKQTDACSS 138

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
            |||||:|||||||||||||||||||||:|||||||||||:||||::|||||||||||||||||||
 Frog   139 LQGFLVFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPRISTAVVEPYNSILTTHTTLE 203

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            |||||||||||||||:|.||||||||||..|||||.|||||||||||||||||||||||||||||
 Frog   204 HSDCAFMVDNEAIYDLCHRNLDIERPTYMALNRLISQIVSSITASLRFDGALNVDLTEFQTNLVP 268

  Fly   262 YPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPK 326
            |||||||||||||:|||.||||||||||:||||||||.|||||.|||||||||||||||||||||
 Frog   269 YPRIHFPLVTYAPIISANKAYHEQLSVADITNACFEPCNQMVKCDPRHGKYMACCMLYRGDVVPK 333

  Fly   327 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |||.|||:||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
 Frog   334 DVNVAIASIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTVIAEAWARL 398

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY 450
            |||||||:|||||||||||||||||||||||||||||||||||||:||.:.|.|| |||
 Frog   399 DHKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIDSFEEENEG-EEY 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84DNP_524264.1 PTZ00335 1..439 CDD:185562 380/436 (87%)
tuba8NP_001090799.1 PTZ00335 9..446 CDD:185562 380/436 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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