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Protein Alignment Rtnl2 and AT3G61560
DIOPT Version :9
Sequence 1: | NP_001246964.1 |
Gene: | Rtnl2 / 40903 |
FlyBaseID: | FBgn0015831 |
Length: | 255 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001319815.1 |
Gene: | AT3G61560 / 825329 |
AraportID: | AT3G61560 |
Length: | 253 |
Species: | Arabidopsis thaliana |
Alignment Length: | 174 |
Identity: | 48/174 - (27%) |
Similarity: | 79/174 - (45%) |
Gaps: | 25/174 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 NLLLWRN---SRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRLLVQFWSIWKKDE 82
::.|||: |...|.|.|.| .:|.:::.:..:|::..:.|..|.|.. ||....:...|..
plant 70 DVFLWRDKKLSASVLGVATAI-WVLFELVEYHFLSLVCHILIFALAALF---LLSNAHAFMNKTP 130
Fly 83 NKDQILRFYPHPKIEIPREETLYLAGKAVSHIN--LILNRMIELLLVEKWEDSLKFLVLLCG--- 142
.| .|:|.|..|..|.:.....:.:| .::.|.|.| ..|..|||:::.|
plant 131 PK--------IPEIHIKEEHFLMIVSALRNELNQAFVILRSIAL-----GRDLKKFLMVVFGLWI 182
Fly 143 INLLGDCFNGLTLLIFGHLFIFTVPKLYESYKPFVDVQIRKFRK 186
|:::|:.||.|||:....:.:.|||.|||.::..||....|..|
plant 183 ISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLK 226
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rtnl2 | NP_001246964.1 |
Reticulon |
21..183 |
CDD:280592 |
46/169 (27%) |
AT3G61560 | NP_001319815.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
65 |
1.000 |
Domainoid score |
I3611 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1792 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
54 |
1.000 |
Inparanoid score |
I2602 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_110713 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.760 |
|
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