DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtnl2 and AT3G10260

DIOPT Version :10

Sequence 1:NP_524263.2 Gene:Rtnl2 / 40903 FlyBaseID:FBgn0015831 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_850552.1 Gene:AT3G10260 / 820188 AraportID:AT3G10260 Length:267 Species:Arabidopsis thaliana


Alignment Length:183 Identity:49/183 - (26%)
Similarity:84/183 - (45%) Gaps:43/183 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NLLLWRN---SRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRLLVQFWSIWKK-- 80
            ::|||||   |...|:..|.|.:|...:..|    .:|:|...:|:.     ::.||  :|..  
plant    83 DVLLWRNKKISASVLMGATAIWVLFEWINFH----FLSLVCYALLLG-----MIAQF--VWSNAS 136

  Fly    81 ---DENKDQILRFYPHPKIEIPRE---ETLYLAGKAVSHINLILNRMIELLLVEKWEDSLK-FLV 138
               :.::.::      |::.:|::   |.....||.|       ||.:..|.....:.:|| ||:
plant   137 GFLNRSQSRV------PRLVLPKDFFAEVGVAVGKEV-------NRGLLFLQDLACKGNLKQFLM 188

  Fly   139 LLCGI---NLLGDCFNGLTLLIFGHLFIFTVPKLYESYKP----FVDVQIRKF 184
            .:.|:   .::|.|.|.||:|..|.:...|:|.|||.|:.    |:|..|.||
plant   189 AVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKF 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtnl2NP_524263.2 Reticulon 21..184 CDD:460562 47/181 (26%)
AT3G10260NP_850552.1 Reticulon 82..234 CDD:460562 44/174 (25%)

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